Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02266 ATGGCATTTCTAAAAGCTAAACTGCCTGTGTATTTGTATCCCTACCTTCGCACATCAAACAAGTTGGCACCATATGAGGATTTGAGACTTGGTACTCTTGGAGTCATTGCTGCTACAGTGAAGGTTAAGACCAGAGAAGCAATAGATTTCCTGCTGGAAAGTGAAGTCATGCCACTGTGCTTACACAGTATAGAAGTTGGCAGAGAACTGTCCAAAACTGTTGCAGCTTTTATTGTTGAGAAAATTCTGTCAGATCATGCTGGTATGGCTTATGTTTGTGTTATACCGGAGCGCTATTATGCAGTTACCCGAGCTTTGGACATACTGGCAGGTTCTCAGAATCAACCTTCATCGCGGCTTGTTAAGCTGTTGATTTCGTGTTATACCTATCTCTCAGAAAAAGAAGGATTGTTTAGGCAGAAAACAATTCCACCACCACCACCACCAGCATCATCTTAA 459 0.4227 MAFLKAKLPVYLYPYLRTSNKLAPYEDLRLGTLGVIAATVKVKTREAIDFLLESEVMPLCLHSIEVGRELSKTVAAFIVEKILSDHAGMAYVCVIPERYYAVTRALDILAGSQNQPSSRLVKLLISCYTYLSEKEGLFRQKTIPPPPPPASS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02266 152 Pfam Cell differentiation family, Rcd1-like 2 135 - -
Trre2g02266 152 Gene3D - 1 143 IPR011989 -
Trre2g02266 152 PANTHER UNCHARACTERIZED 1 135 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02266 Trre-Chr2 18645301 18652707 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Trre2g02266 Rcd1 4.2e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02266 K12606 - sly:101263473 149.828