Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02235 | ATGGGAAACAACTGTGTAGGATCGAGAACCTCACGTTCAAACGACGAACCATCACCCTCTAAACTTCCAACTCCATCTTGCTGGTCGCGTGGAACCAAGAAAGATCATTTACAGAAAACTAATCCAACAAAAGCTACAGAAACTGTTCAAAATCGGCCTCCACAGGTAGTGAAAATTGAAAAGGAGGATGTAAAACCACAACAGCAACAACAACAAAAACCACAAACGAATCAAGTTGTTGTTGCTACACCTGCAAAACCAAAGAAACCTCACAATGTGAAAAGAATGGCAAGTGCAGGACTAAAAACAGATTCAGTTTTACAGCGAAAAACGGTTAGTCTTAGAGATTTTTATAATTTGGGACCAAAGCTTGGACAAGGGCAATTTGGAACTACGTTTCTTTGTGTGGAGAAAGCTACTGGAAAAGAGTATGCATGTAAATCCATCATGAAGAGAAAATTGTTGACAGAAGAGGATGTTGAAGATGTGAGAAGGGAGATTCAGATTATGCATCACTTGGCCGGGAGTCCGAATGTGATTTCAATTAAGGAAGCGTCTGAGGATGCTGTTGCTGTTCATGTTGTTATGGAGTTGTGTTCGGGTGGTGAACTTTTTGATAGGATTGTTGAAAGAGGCCATTATACAGAAAGAAAAGCAGCTAAACTTGCAAGGACTATTGTTGGTGTAATTCAGTCATGTCATTCTCTTGGTGTAATGCATCGTGATCTTAAGCCGGAGAATTTTCTTTTCGTTAATCAACAGGAAGATTCTCCTCTTAAGGCTATAGATTTTGGACTATCTGCTTTTTTTAAACCAGGTGACATTTTCAATGATGTAGTAGGAAGTCCTTACTATGTTGCACCTGAAGTTTTACGCAAGCGGTATGGCCCGGAAGCGGATGTGTGGAGTGCCGGTGTCATCTTGTACATTCTCTTATGTGGCGTTCCTCCATTTTGGGGCGAATCGGAGCAAGAGATATTTGAGGCCATTTTGAATAGTGATCTTGATTTCTCTTCAGATCCATGGCCTAGTATCTCCGAAAGTGCAAAAGACTTGGTTATGAAGATGCTTGTCAGAGACCCTAGTAAACGGTTATCAGCTTATGACGTTCTTCGCCATCCATGGATCCAGGTGGACGGAGCAGCTCCTGACAAGCCTCTTGATTCGGCAGTTTTAAGCCGCATGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTCTCTGAAGATGAAATTGCTGGATTGAGAGAAATGTTTAAGATGATCGACACTGACAATAGTGGTCAAATTACTTTTGAAGAACTCAAGATCGGACTGAAAAAATTTGGTGCCAATCTCAATGAATCTGAAATTTACGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGTACAATTGACTATGGAGAATTCATAGCTGCAACATTGCATCTAAACAAAATTGATAGGGAAGATCATTTAGTTGCAGCTTTCTCATATTTCGATAAAGATGGAAGTGGATATATCACTAAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGCCTATCGAATGTCCCCTTGGAGGAAATGATCCGAGAAGCTGATCAAAATAATGATGGACGAATAGACTACAACGAATTTGTGGCTATGATGCAGAGAGGAAATGCAGAAAGGAGAGGTCGAAAGGGTAGCAGTACTAGTTTTAGAATTGGATTTAGGGAAGCACTACCAGTATGTTAA | 1749 | 0.4037 | MGNNCVGSRTSRSNDEPSPSKLPTPSCWSRGTKKDHLQKTNPTKATETVQNRPPQVVKIEKEDVKPQQQQQQKPQTNQVVVATPAKPKKPHNVKRMASAGLKTDSVLQRKTVSLRDFYNLGPKLGQGQFGTTFLCVEKATGKEYACKSIMKRKLLTEEDVEDVRREIQIMHHLAGSPNVISIKEASEDAVAVHVVMELCSGGELFDRIVERGHYTERKAAKLARTIVGVIQSCHSLGVMHRDLKPENFLFVNQQEDSPLKAIDFGLSAFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLCGVPPFWGESEQEIFEAILNSDLDFSSDPWPSISESAKDLVMKMLVRDPSKRLSAYDVLRHPWIQVDGAAPDKPLDSAVLSRMKQFTAMNKLKKMALRVIAENLSEDEIAGLREMFKMIDTDNSGQITFEELKIGLKKFGANLNESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKIDREDHLVAAFSYFDKDGSGYITKDELQKACEEFGLSNVPLEEMIREADQNNDGRIDYNEFVAMMQRGNAERRGRKGSSTSFRIGFREALPVC | 582 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02235 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 455 | 490 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 103 | 550 | - | - | |
Trre2g02235 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 504 | 516 | IPR018247 | - | |
Trre2g02235 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 538 | 550 | IPR018247 | - | |
Trre2g02235 | 582 | ProSitePatterns | Protein kinases ATP-binding region signature. | 124 | 151 | IPR017441 | GO:0005524 | |
Trre2g02235 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 419 | 454 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | CDD | EFh | 495 | 555 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | SUPERFAMILY | EF-hand | 415 | 556 | IPR011992 | - | |
Trre2g02235 | 582 | FunFam | Calcium-dependent protein kinase 1 | 384 | 558 | - | - | |
Trre2g02235 | 582 | Gene3D | Phosphorylase Kinase; domain 1 | 121 | 203 | - | - | |
Trre2g02235 | 582 | Pfam | EF-hand domain pair | 424 | 484 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | Pfam | EF-hand domain pair | 495 | 555 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | MobiDBLite | consensus disorder prediction | 1 | 94 | - | - | |
Trre2g02235 | 582 | FunFam | Calcium-dependent protein kinase 1 | 120 | 203 | - | - | |
Trre2g02235 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 432 | 444 | IPR018247 | - | |
Trre2g02235 | 582 | FunFam | Calcium-dependent protein kinase SK5 | 204 | 388 | - | - | |
Trre2g02235 | 582 | Gene3D | - | 383 | 560 | - | - | |
Trre2g02235 | 582 | SUPERFAMILY | Protein kinase-like (PK-like) | 116 | 377 | IPR011009 | - | |
Trre2g02235 | 582 | Gene3D | Transferase(Phosphotransferase) domain 1 | 204 | 382 | - | - | |
Trre2g02235 | 582 | CDD | STKc_CAMK | 117 | 375 | - | - | |
Trre2g02235 | 582 | Pfam | Protein kinase domain | 118 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02235 | 582 | SMART | serkin_6 | 118 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02235 | 582 | ProSiteProfiles | Protein kinase domain profile. | 118 | 376 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02235 | 582 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Trre2g02235 | 582 | ProSitePatterns | EF-hand calcium-binding domain. | 468 | 480 | IPR018247 | - | |
Trre2g02235 | 582 | CDD | EFh | 424 | 483 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 238 | 250 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g02235 | 582 | SMART | efh_1 | 423 | 451 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | SMART | efh_1 | 459 | 487 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | SMART | efh_1 | 495 | 523 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | SMART | efh_1 | 529 | 557 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 491 | 526 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 530 | 560 | IPR002048 | GO:0005509 | |
Trre2g02235 | 582 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02235 | Trre-Chr2 | 18259783 | 18262826 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02235 | 47 | 558 | EF-hand Containing Proteins | AT3G10660 | 74.904 | 0.0 | 827 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Trre2g02235 | Pkinase | 5.9e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02235 | K13412 | - | gmx:100783079 | 973.77 |