Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02219 ATGGAGAGAGGAAATACAATGGGGATATCTAGGACAAAATCAGATCAGCTGGTGGAGTCAATGGCCGCGGCTCTAAAGTCGCCACAATCGAGTGATCACTCAGCCAATGGAACCGTGGAAGGGAGCGGAGGATTGTCGAGGAAGTCAAGCCGGAGGATAACTGCGGCGTCGCCGGGGCGAAGCGGAGGGAGGAACACACACATAAGGAAAACAAGAAGTGCTCAATTGAAGATTGATTTTGATGAGTTGGGTAGTGGCGCGGCTCTTAGCCGAGCTTCAAGTGCCAGCTTGGGTCTCTCATTTTCATTCACTGGATTCACTATGCCTCCTGATCAAATTGCTGATACAAAACCATTCAGTGATGATGATATGATTCCTGAGGATATTGAAGCAGGAATTAGGACAAAGACAAAGTTTCAAACAGAACCAACTCTGCCTATATATCTTAAGTTCACTGATGTGACCTACAAGGTAGTGCTTAAAGGCATGACATCAAGTGAGGAGAAAGATATCTTGTATGGGATCAGTGGTTCTGTAAATCCAGGTGAAGTTTTAGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTTTAAATCTCCTTGGAGGAAGGCTAACTCAGCACACAGTTGGTGGTTCTATCACTTACAATGACCAATCATATTCTAAGTTCCTAAAAAGCAGGATAGGATTTGTGACACAAGATGATGTTTTGTTTCCGCATCTGACCGTGAAAGAGACGTTGACATACGCAGCTCGGTTAAGACTTCCAAAGACATTCACTAAAGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCTATGAACTTGGCTTAGAGAGGTGTCAAGATACTATGATCGGTGGTTCATTTGTTCGCGGAATATCTGGTGGAGAGAGGAAGAGAGTTTGTATCGGAAATGAGATCATAATCAACCCTTCTATTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACTGCCTTGAAGATTGTTCAGATGCTGCAAGACATAGCAGAGGCGGGGAAAACAGTAGTGACAACAATTCATCAACCATCGAGTAGACTCTTCCACAAATTCGACAAGTTGATCCTTCTTGGGAAAGGAAGTTTGCTTTACTTTGGAAAAGCATCGGAAGCAATGAACTACTTCCAATCTATAGGATGTTCACCGCTTATTTCCATGAATCCAGCAGAGTTTTTACTAGACCTTGCTAATGGAAACATAAATGATGTTTCCGTACCGTCAGAGTTGGAGGATAAAGTGCTAATTGGAAATGCAGAAGTTCAAAAATATAACGGAAAACCATCACCAGCAGTAGTCCATGAGTATCTAGTGGAGGCGTATGAATCTCGAGTTGCGGAAACAAAGAAAAAGATAATGGTTTCTGTACCTCAAGATGAAGCTTTGAAGGATAAAATATGTTCACAAAGACAATGGGGAGCAAGGTGGGATGAGCAATTTTCCATACTTTTTTGGAGAGGAATCAAAGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACACAAGTTTTATCCACTGCAATCATCTTAGGATTACTATGGTGGCAATCAGATGCTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGACTACTTTTCTTTATTGCTGTGTTTTGGGGATTCTTTCCGGTCTTTACTGCGATATTTACATTTCCTCAAGAGAGAGCCATGTTGAATAAAGAACGTGCAGCAGATATGTACCGATTAAGTGCATACTTCCTTGCTAGAACTACAAGTGACCTTCCATTAGACCTGATATTACCGGTGCTTTTTCTCCTCGTTGTTTACTTCATGGCTGGTCTGAGACTAAGTACAGCCCCCTTTTTCCTCACCATTCTAACTGTTTTCCTCTGCATCATTGCAGCTCAGGGTCTTGGACTTGCTATCGGTGCTACGCTTATGGACTTGAAAAGAGCTACAACTCTAGCTTCGGTAACTGTGATGACCTTCATGCTTGCTGGAGGATTTTTCGTCCAGAAAGTACCGATATTCATTTCTTGGATCCGCTACATGTCTTTCAACTACCACACATACAAACTGTTGCTCAAGGTGCAATATGAACATCTCACACCTGTCATAAATGGAGTCAAAATTGACAGTGGTTTGACAGAAGTAGCTGCACTGATTGCCATGGTTTTCGGTTACCGTTTCTTGGCATATCTTTCATTGCGGCGAATGAAACTTCAATAG 2223 0.4229 MERGNTMGISRTKSDQLVESMAAALKSPQSSDHSANGTVEGSGGLSRKSSRRITAASPGRSGGRNTHIRKTRSAQLKIDFDELGSGAALSRASSASLGLSFSFTGFTMPPDQIADTKPFSDDDMIPEDIEAGIRTKTKFQTEPTLPIYLKFTDVTYKVVLKGMTSSEEKDILYGISGSVNPGEVLALMGPSGSGKTTLLNLLGGRLTQHTVGGSITYNDQSYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTFTKEQKEKRALDVIYELGLERCQDTMIGGSFVRGISGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELEDKVLIGNAEVQKYNGKPSPAVVHEYLVEAYESRVAETKKKIMVSVPQDEALKDKICSQRQWGARWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSTAPFFLTILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPVINGVKIDSGLTEVAALIAMVFGYRFLAYLSLRRMKLQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02219 740 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 149 395 IPR003439 GO:0005524
Trre2g02219 740 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 115 731 - -
Trre2g02219 740 Pfam ABC-2 type transporter 352 450 IPR043926 GO:0140359
Trre2g02219 740 CDD ABCG_EPDR 146 377 - -
Trre2g02219 740 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 387 IPR027417 -
Trre2g02219 740 MobiDBLite consensus disorder prediction 7 61 - -
Trre2g02219 740 MobiDBLite consensus disorder prediction 1 73 - -
Trre2g02219 740 Gene3D - 148 389 IPR027417 -
Trre2g02219 740 SMART AAA_5 181 372 IPR003593 GO:0016887
Trre2g02219 740 Pfam ABC-2 type transporter 488 697 IPR013525 GO:0016020|GO:0140359
Trre2g02219 740 Pfam ABC transporter 174 323 IPR003439 GO:0005524
Trre2g02219 740 ProSitePatterns ABC transporters family signature. 295 309 IPR017871 GO:0005524|GO:0016887
Trre2g02219 740 FunFam ABC transporter G family member 22 159 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02219 Trre-Chr2 18110715 18120251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02219 112 409 Calmodulin-binding Proteins AT2G36910 27.632 4.12e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02219 K05681 - gmx:100798801 1229.93