Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02217 ATGGGCAACAACTGTGTCGGACCAAACCTCGGCGGAAATGGTTTCCTTCAATCCGTTTCGGCTGCCGTATGGAAAACCCGTCCGCCGGAGCCATCGCTTCCTCCAGCTAACGGCGCCGATGACAAAGACAAAAATCAGTCTCCGACATCCTCCAAAACAGAGTCGACTTCCGCCGGAAAAGGTTCCGAAGGTTCTAATAATCCTCCCATGCCGGTTCAGAACACGCCGCCTGAACCGGTGAAAATAGCCTCTGATGAAACAAAACCGCTTCCGCTTGACCATGAAAAGCCTGCTAAAGCTAAACCAGAGGTAGTAAATAATGCACCACCAGCATCTAGTACTACCGGTGGCGGTGGTGGAAGTGGTGGTGGTGGTGGTGGTGAGGGTGAAAAAGCTAAGAAACCTACACATGTGAAAAGGGTATCAAGTGTTGGACTTCAGGTAGAATCTGTATTGGGTAGAAAAACAGAGAATATAAAAGAATTTTTTAGTTTGGGAAGAAAATTAGGGCAAGGGCAATTTGGGACAACATTTTTATGTGTGGAGAAAGGGTCTAATAAGGATTTTGCATGCAAATCAATTGCAAAGAGGAAATTAACAACACAAGAAGATGTTGAGGATGTTAGAAGAGAGATTAGGATAATGCATCACTTAGCTGGTCACCCAAATGTGATACAAATAATTGGTGCTTATGAAGATGCTGTTGCTGTTCATGTTGTTATGGAGTTATGTGCTGGTGGTGAACTTTTTGATAGGATTATACAGAGAGGGCATTATACTGAGAGAAAAGCTGCTGAACTTGCTAGGTTGATTTTAGGTGTTGTTCAAGCTTGTCATTCTTTAGGTGTTATGCATAGAGATTTGAAGCCTGAGAATTTTCTTTTTGTTAGTCATGAAGAAGAATCTCGCCTTAAGACAATTGATTTTGGACTCTCTGTGTTTTTCAGACCAGGTGAAACATTTACTGATGTGGTTGGGAGCCCATACTATGTGGCCCCTGAAGTTTTGCGGAAGAACTATGGTCAAGAATGTGATGTTTGGAGTGCTGGGGTGATCATTTATATTTTACTCAGTGGAGTTCCTCCATTTTGGGATGAAACGGAACAAGGAATATTTGAGCAAGTATTGAAAGGAGAGCTTGACTTTATTTCTGAACCATGGCCCAGCATATCTGAAAGTGCAAAGGATCTTGTTCGAAGAATGCTTGTAAGGGATCCTAAGAAGCGGTTAACGGCACATGAAGTTCTTTGCCATCCTTGGGTTCAGGTTGGTGGTGTTGCCCCTGATAAACCACTTGATTCTGCTGTCTTATCTCGTTTAAAGCAATTCTCTGCAATGAACAAGCTCAAGAAAATAGCCATTCGAGTAATTGCTGAAAATCTGTCCGAGGAGGAAATTGCAGGACTGAAAGAAATGTTCAGGATGATAGACACAGATAATAGCGGACAGATCACTCTTGAAGAACTGAAAAATGGTTTAGAGAGAGTGGGTTCCGTTCTTAAGGATTCTGAAATTACCTGGTTAATGCAAGCGGCAGACATTGATAATAGTGGTACCATAGACTATGGTGAATTTATAGCAGCTATGCTTCATCTAAACAAGGTCCAGAAGGAGGATCATCTATTTGCAGCCTTTAACTACTTTGACAAAGATGGTAGTGGATACATTACAAAGGATGAGCTTCAAAAAGCCTGTGAACAGTTTGGCCTACAAGATGATCATCTAGATGATATAATACGTGAAGCTGATAAGGATAATGATGGACGCATTGACTACAGTGAATTTGTTGCAATGATGCAAGACACTGATTTTGGCAAAAAGGGGATATAA 1830 0.4186 MGNNCVGPNLGGNGFLQSVSAAVWKTRPPEPSLPPANGADDKDKNQSPTSSKTESTSAGKGSEGSNNPPMPVQNTPPEPVKIASDETKPLPLDHEKPAKAKPEVVNNAPPASSTTGGGGGSGGGGGGEGEKAKKPTHVKRVSSVGLQVESVLGRKTENIKEFFSLGRKLGQGQFGTTFLCVEKGSNKDFACKSIAKRKLTTQEDVEDVRREIRIMHHLAGHPNVIQIIGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARLILGVVQACHSLGVMHRDLKPENFLFVSHEEESRLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLRKNYGQECDVWSAGVIIYILLSGVPPFWDETEQGIFEQVLKGELDFISEPWPSISESAKDLVRRMLVRDPKKRLTAHEVLCHPWVQVGGVAPDKPLDSAVLSRLKQFSAMNKLKKIAIRVIAENLSEEEIAGLKEMFRMIDTDNSGQITLEELKNGLERVGSVLKDSEITWLMQAADIDNSGTIDYGEFIAAMLHLNKVQKEDHLFAAFNYFDKDGSGYITKDELQKACEQFGLQDDHLDDIIREADKDNDGRIDYSEFVAMMQDTDFGKKGI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02217 609 ProSitePatterns EF-hand calcium-binding domain. 513 525 IPR018247 -
Trre2g02217 609 Gene3D - 428 604 - -
Trre2g02217 609 ProSitePatterns Serine/Threonine protein kinases active-site signature. 283 295 IPR008271 GO:0004672|GO:0006468
Trre2g02217 609 ProSitePatterns Protein kinases ATP-binding region signature. 169 196 IPR017441 GO:0005524
Trre2g02217 609 Pfam EF-hand domain pair 539 600 IPR002048 GO:0005509
Trre2g02217 609 Pfam EF-hand domain pair 469 529 IPR002048 GO:0005509
Trre2g02217 609 ProSiteProfiles EF-hand calcium-binding domain profile. 536 571 IPR002048 GO:0005509
Trre2g02217 609 ProSiteProfiles EF-hand calcium-binding domain profile. 464 499 IPR002048 GO:0005509
Trre2g02217 609 FunFam Calcium-dependent protein kinase SK5 249 433 - -
Trre2g02217 609 SMART efh_1 540 568 IPR002048 GO:0005509
Trre2g02217 609 SMART efh_1 504 532 IPR002048 GO:0005509
Trre2g02217 609 SMART efh_1 468 496 IPR002048 GO:0005509
Trre2g02217 609 SMART efh_1 574 602 IPR002048 GO:0005509
Trre2g02217 609 SUPERFAMILY Protein kinase-like (PK-like) 163 422 IPR011009 -
Trre2g02217 609 MobiDBLite consensus disorder prediction 49 69 - -
Trre2g02217 609 SUPERFAMILY EF-hand 460 600 IPR011992 -
Trre2g02217 609 Gene3D Transferase(Phosphotransferase) domain 1 249 426 - -
Trre2g02217 609 FunFam Calcium-dependent protein kinase 1 165 248 - -
Trre2g02217 609 MobiDBLite consensus disorder prediction 21 141 - -
Trre2g02217 609 ProSiteProfiles EF-hand calcium-binding domain profile. 572 605 IPR002048 GO:0005509
Trre2g02217 609 FunFam Calcium-dependent protein kinase 1 429 603 - -
Trre2g02217 609 ProSiteProfiles Protein kinase domain profile. 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02217 609 ProSitePatterns EF-hand calcium-binding domain. 477 489 IPR018247 -
Trre2g02217 609 ProSiteProfiles EF-hand calcium-binding domain profile. 500 535 IPR002048 GO:0005509
Trre2g02217 609 CDD STKc_CAMK 162 420 - -
Trre2g02217 609 ProSitePatterns EF-hand calcium-binding domain. 583 595 IPR018247 -
Trre2g02217 609 PANTHER SERINE/THREONINE-PROTEIN KINASE 155 595 - -
Trre2g02217 609 SMART serkin_6 163 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02217 609 ProSitePatterns EF-hand calcium-binding domain. 549 561 IPR018247 -
Trre2g02217 609 Gene3D Phosphorylase Kinase; domain 1 165 248 - -
Trre2g02217 609 MobiDBLite consensus disorder prediction 87 101 - -
Trre2g02217 609 Pfam Protein kinase domain 164 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02217 Trre-Chr2 18076607 18082648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02217 1 609 EF-hand Containing Proteins AT2G38910 72.920 0.0 900
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g02217 Pkinase 1.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02217 K13412 - gmx:100813232 1008.05