Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02214 ATGATTTATGGTAGGTGTGCAGCTTGCAAGAGTCAAAGAAGAAGGTGCCCTTCTGATTGCATTTTCTCTCCCTATTTCCCTCCCAATGATCCTCAAAAATATGCTTCTGTTCACCGAATCTATGGTGGTAGTAATGTTGGGAAAATGCTTCAGCAATTGCCTCCCTATGTAAGAGAACAAGCTGCAAATACTATGTATTTAGAAGCACAGTGTAGGATTCAAGATCCTATTTATGGATGTGTTGGAATTATCTCTAAATTGTATCAACAAATCTATGATACAGAAGTTGAATTGGCCAAAATCAAAACTCAAATTGCTTGTCTTAAAATCCAAAATCATCAACAATTTGAAGCTGAATCCAATTTAAGCTCTTTGCCACCACTGAGTAACAACATGGAGATGGAGCACTTTCAATGGCCTAGTCAAACTCTTAATTAG 438 0.3721 MIYGRCAACKSQRRRCPSDCIFSPYFPPNDPQKYASVHRIYGGSNVGKMLQQLPPYVREQAANTMYLEAQCRIQDPIYGCVGIISKLYQQIYDTEVELAKIKTQIACLKIQNHQQFEAESNLSSLPPLSNNMEMEHFQWPSQTLN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02214 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 127 - -
Trre2g02214 145 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Trre2g02214 145 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02214 Trre-Chr2 18052453 18053467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02214 5 106 AS2 family AT3G26660 64.706 5.17e-47 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre2g02214 LOB 6.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02214 - - mtr:25497793 207.608