Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02182 ATGAATGATGATAAAAAGTTGAAGTATCCTTATTATTCTCAGTGGGTCGCGCTGTCTTCGCAACTCGCCCAATCCCTACTGGAGATCTCATTCACACCGCCGAGCCCGCCGTCTGTCACCCTTCACATTCCTCCCTCCATCCCGTTTGCTATTCATGCCTCGCCAGACTCCCTAACCTCTCCTCCCCCTTTTGTTCTCACCGTTGCCTCCAACGCAGAATATTACGATGTTGAGATGAAAGCAAATTGGGAGGAGTTTGATAACTATTGCCGGAACCGAGGTTTAAAGTATCCCTTTCTGGTAAAGCGATTGGCTTGCATGATCATATCAGGAGTTACCAGAAGTGATAGTATTGACATACTTCAACCTGCCAATTTGACACCTGAGATGATTCTAGAGATGGAAGAGGAGTTTACCTTGCTAAGGAATGCCTTCACAAAAGCACTTATTGAAGATGAACAAATTGCCTTTTTAACCAAGCAATGGTACATTAGTGTTTTGGCACGAATTCGAATCAATGCATTTCGCATTGAGTTGGCTGGTGGTGGATCATATGAAGATCTTCTTTCTTCAGCATTTGCATCTGTAGAAGCTGAAGCTGGTGTTGGAAATGCTGTCTATATACTTCCTTCATTTTATAATCATGATTGTGATCCTAATGCACACATTATATGGATAGATAATGCAGTGGCAAAATTGAAGACCCTCCGCGATATTGATGAAGGTGAAGAACTGAGAATCTGCTATATTGATGCCAGTATGGACCACAATGCTCGACGAAAGCTATTGTTTCGAGGATTTGGATTTCATTGCAATTGTAGTAGGTGTTTGCATGGTGATTAG 843 0.4247 MNDDKKLKYPYYSQWVALSSQLAQSLLEISFTPPSPPSVTLHIPPSIPFAIHASPDSLTSPPPFVLTVASNAEYYDVEMKANWEEFDNYCRNRGLKYPFLVKRLACMIISGVTRSDSIDILQPANLTPEMILEMEEEFTLLRNAFTKALIEDEQIAFLTKQWYISVLARIRINAFRIELAGGGSYEDLLSSAFASVEAEAGVGNAVYILPSFYNHDCDPNAHIIWIDNAVAKLKTLRDIDEGEELRICYIDASMDHNARRKLLFRGFGFHCNCSRCLHGD 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02182 280 CDD SET_SMYD 189 276 - -
Trre2g02182 280 Pfam SET domain 178 249 IPR001214 GO:0005515
Trre2g02182 280 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 61 278 - -
Trre2g02182 280 Gene3D SET domain 141 279 IPR046341 -
Trre2g02182 280 SUPERFAMILY SET domain 202 274 IPR046341 -
Trre2g02182 280 ProSiteProfiles SET domain profile. 124 250 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02182 Trre-Chr2 17821741 17826280 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Trre2g02182 SET 9.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02182 - - tpra:123906125 399.823