Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02169 ATGGACAAAAAAAACATTGAAAGAGAGACACATGACTTAATGAATGTTGAGTCATTCTCTCAACTTCCATTCATCCGCCCTCCACCCACCATCAAAGAAAAAGGCATCCGCCTCTTCGGCATCGAATTCGGCGCTACCACGGAAGACAACGACGACTCCGAGTCACCGGAAACAACTACAACTACCAACAACAACAACATTAACACATTTGATGTTGAGAACAACAACAAAGACAACAATAGTGAAAACAATAGAAGATTTGAATGTCATTATTGTTGTAGAAACTTCCCAACTTCACAAGCTTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGCCAACATGCTAAACGACAACACCTTCAATCAACTATGGTACATGCTACTACTTTCTCTGATCCACATCTTTATCATCATCAACAACAACAACATCCTCTCTATAGATTCACATCATCATCACCATCATCATTATCATCATCACCTTCTTATCCAACATGGAACACAAACTCATCAAATTCAGCTGGTGCAAGATTTTATAACCATCCAACTTCTTCTTACTCTCACCAACAACCTATTAATGGTAGTCCTTTAGCTTTTTGGCGTATTCCGAATGGCGCCGTTCAGAGTAACCCTAGTTTCAGCCATGAACGCCCTTTACCTTTGCTTGCTTCCGAGGAAAGAGCGAATTTGTCGCAAGTTAGTCATGGAGTATCTTCTTCTTCTGCATCCCATAATCGCTACGTTTATGACAAACGTAGCGACCATGTTAGTTTGGATCTTCATCTCTAA 789 0.4056 MDKKNIERETHDLMNVESFSQLPFIRPPPTIKEKGIRLFGIEFGATTEDNDDSESPETTTTTNNNNINTFDVENNNKDNNSENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATTFSDPHLYHHQQQQHPLYRFTSSSPSSLSSSPSYPTWNTNSSNSAGARFYNHPTSSYSHQQPINGSPLAFWRIPNGAVQSNPSFSHERPLPLLASEERANLSQVSHGVSSSSASHNRYVYDKRSDHVSLDLHL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02169 262 MobiDBLite consensus disorder prediction 148 168 - -
Trre2g02169 262 PANTHER ZINC FINGER PROTEIN GIS 1 262 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Trre2g02169 262 MobiDBLite consensus disorder prediction 45 81 - -
Trre2g02169 262 ProSiteProfiles Zinc finger C2H2 type domain profile. 87 114 IPR013087 -
Trre2g02169 262 MobiDBLite consensus disorder prediction 56 77 - -
Trre2g02169 262 SUPERFAMILY beta-beta-alpha zinc fingers 83 115 IPR036236 -
Trre2g02169 262 ProSitePatterns Zinc finger C2H2 type domain signature. 89 109 IPR013087 -
Trre2g02169 262 MobiDBLite consensus disorder prediction 102 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02169 Trre-Chr2 17709624 17710412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02169 1 262 C2H2 Transcription Factor Family AT3G58070 39.298 1.51e-44 149