Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02149 ATGCTTTCTATAATTCATGTACCAGCTATCATTTTCTTTACGTTAATCCTTTTTTATCATTCAAACGGACAATTGAATGCAACTTTTTATTCTAACACATGCCCAAATGTGTCCTCCATTGTGAGAAATGCTGTCCAAACGGCTCTACAATCTGATTCGCGAATTGGCGCAAGTCTAACTCGCCTACATTTTCATGATTGTTTTGTTAATGGGTGTGACGCATCGATTTTGTTAGACCAAGGTGGAAACATTACACAAAGCGAGAAAAATGCAGCTCCCAATTTCAATTCCATTCGAGGGTTTGGTGTAATCGATACAATTAAAAGCTCTCTTGAAAGTTCATGTTCTGGCATTGTATCTTGTGCTGATATTCTTGCCCTTGCAGCCGAATCTTCCGTGTCCTTGTCAGGGGGTCCTTCATGGAATGTCCTACTTGGAAGAAGGGATGGTTTAACAGCAAATCAAGCTGGAGCCAATAGCTCCATTCCCTCTCCATTTGATAGCCTTGCTAATACTACATCCAAATTCTCTGCTGTTAACCTTGACATTACTGATCTTGTTGCACTGTCAGGTGCACACACTTTTGGACGTGCTCAATGCCAATTTTTCTCCCAAAGATTATTCAATTTCAGTGGCACTGGAAGCCCAGACCCAACATTAAACACAACATATTTAGCAACACTTCAACAAAATTGTCCACAAAATGGTAACGGATCAACTTTGAACAACTTTGATCCATCATCACAAGACACATTTGACAACAACTACTTCACCAATCTATTAAACAAAATGGGTCTTCTACAAAGAGACCAACAACTTTTCTCTACTAATGGTTCTTCCACAATCTCAATTGTTAACAGCTTTGCCAACAACCAAACAGCATTTTTTAACCAATTTGCTCAATCAATGATCAATATGGGTAATATTAGCCCTTTGACGGGAAATCAGGGTGAAATCAAAATCGATTGTAAGAAAGTCAATGGAAGTTAA 990 0.3869 MLSIIHVPAIIFFTLILFYHSNGQLNATFYSNTCPNVSSIVRNAVQTALQSDSRIGASLTRLHFHDCFVNGCDASILLDQGGNITQSEKNAAPNFNSIRGFGVIDTIKSSLESSCSGIVSCADILALAAESSVSLSGGPSWNVLLGRRDGLTANQAGANSSIPSPFDSLANTTSKFSAVNLDITDLVALSGAHTFGRAQCQFFSQRLFNFSGTGSPDPTLNTTYLATLQQNCPQNGNGSTLNNFDPSSQDTFDNNYFTNLLNKMGLLQRDQQLFSTNGSSTISIVNSFANNQTAFFNQFAQSMINMGNISPLTGNQGEIKIDCKKVNGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02149 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Trre2g02149 329 SUPERFAMILY Heme-dependent peroxidases 24 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 Pfam Peroxidase 41 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 FunFam Peroxidase 28 176 - -
Trre2g02149 329 Gene3D - 29 327 - -
Trre2g02149 329 ProSiteProfiles Plant heme peroxidase family profile. 24 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 CDD secretory_peroxidase 24 326 IPR033905 GO:0004601|GO:0042744
Trre2g02149 329 FunFam Peroxidase 163 306 - -
Trre2g02149 329 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02149 329 Gene3D Peroxidase, domain 2 163 306 - -
Trre2g02149 329 PANTHER PEROXIDASE 72-RELATED 22 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02149 Trre-Chr2 17516379 17518436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02149 5 329 Peroxidase AT5G06720 70.769 1.51e-166 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02149 K00430 - gmx:100811249 541.576