Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02144 ATGAATTATTCTGGACGTGCTTTTTACAATATTCCATACACACTTTGGAACAAAAACAAAATTGCTTCTTTCAACACAAATTTTGTTCTCAACATAGGTCCTCAAACTTCACCTGGTGGAGAAGGCATAGCTTTTGTCATAGCTTCAGATACAACTCTCCCTGAAAACAGTGATGGACAATGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTATCAAGCCAGAATTCTTGCAGTTGAGTTCGATACACGACAAAGTTCAACCGAAGATGGTCCAAACAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAACATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAATCATAAGAATTGAATATTTCAATGATGTAATATCTGTTTTTGGTTCAATGAATGTAAATTCACAAGATTCTATGGAGACTCTCTTGGTATCTCCAATTCTTAATCTCTCTTACTATTTTACGCAAGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAGTTACACTGAGCTAAACTGTGTAAAATCATGGGAGTTTGATGGTGTAGATATTGGTGATAAAAAAAGTGACTTGTGGATGTTGATTACAATACCAATAGTATTATTGATGATGATCATAGGTGGATTAGTCTTTTTCTTCCTTTATTTTCAAAGGAAAAAAAACTTAGAGATTGAAAAAGATACATATGGAGGGATAGAGGATCAAATTCAACACTCATCTTTGGCTCCAAAGAAATATCGACTAACGGAATTGATGAGAGCAACAGGTGGATTCAGCCATCAGAATAAACTTGGCGAAGGTGGATTTGGAATGGTTTATAAGGGAACACCAGGTTATATGGCACCAGAAAGTTTTCTAACAGGAAGAGCGACAGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTAGAAGTTGTGTGTGGGAGAAGACCAGGAAATGTGTTTGCACAAGAGGATTATAAAAATAGTATTGTGTATCAAGTTTGGGAGCTTTTTGGAAAAGGTAAAATTGTTAGTGTTGTGGATAAAAGGATAAGTTGTGAAGAGCATGAGGTTGAGAGGGTAAAATGGGAAGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCATGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTAATGGTTCTAAATGGAGAAGTTTCTCCTCCAAATGTTCCAATGGAAAGACCTTCTTTTGTTTGGCCTGCCATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGAACACTCAGTCCATTCACTCAACTTAGTGGAAGATAG 1350 0.36 MNYSGRAFYNIPYTLWNKNKIASFNTNFVLNIGPQTSPGGEGIAFVIASDTTLPENSDGQWLGIVNASTNGTYQARILAVEFDTRQSSTEDGPNNHVGININSISSLKQTSLSNTKVNLSSGKDVIIRIEYFNDVISVFGSMNVNSQDSMETLLVSPILNLSYYFTQEVYVGFSASTSSYTELNCVKSWEFDGVDIGDKKSDLWMLITIPIVLLMMIIGGLVFFFLYFQRKKNLEIEKDTYGGIEDQIQHSSLAPKKYRLTELMRATGGFSHQNKLGEGGFGMVYKGTPGYMAPESFLTGRATVETDVYAFGVLVLEVVCGRRPGNVFAQEDYKNSIVYQVWELFGKGKIVSVVDKRISCEEHEVERVKWEEEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPNVPMERPSFVWPAMPSSFKEGEDNSLINGTLSPFTQLSGR 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02144 449 Gene3D Transferase(Phosphotransferase) domain 1 267 420 - -
Trre2g02144 449 CDD lectin_legume_LecRK_Arcelin_ConA 4 191 IPR001220 GO:0030246
Trre2g02144 449 SUPERFAMILY Protein kinase-like (PK-like) 285 422 IPR011009 -
Trre2g02144 449 SUPERFAMILY Protein kinase-like (PK-like) 251 288 IPR011009 -
Trre2g02144 449 Gene3D - 1 201 - -
Trre2g02144 449 Pfam Legume lectin domain 4 195 IPR001220 GO:0030246
Trre2g02144 449 Pfam Protein kinase domain 282 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02144 449 ProSiteProfiles Protein kinase domain profile. 30 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02144 449 PANTHER - 4 288 - -
Trre2g02144 449 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 192 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02144 Trre-Chr2 17452641 17454452 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02144 287 416 Receptor kinase-like Gene Family AT3G45390 38.931 7.93e-16 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02144 Lectin_legB 7e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02144 - - tpra:123883598 405.986