Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02143 | ATGAACTTCTTTTCCTTGCTATTAACACTCATATTCACTATCATAGCCTTTACCAAAATTAGTTGCTTGAATTTTAATTTCACAACCTTCCAACCAAGTGATGAATCCTATTTGTTACTAAGCAAAAACTCAAAAATATACTTAAATGCTATCCAAATAACACCAGATATTCGTGGTGAAATAATGAATTATTCTGGACGTGCTTTTTACAATATTCCATACACACTTTGGAACAAAAACAAAATTGCTTCTTTCAACACAAATTTTGTTCTCAACATAGGTCCTCAAACTTCACCTGGTGGAGAAGGCATAGCTTTTGTCATAGCTTCAGATACAACTCTCCCTGAAAACAGTGATGGACAATGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTATCAAGCCAGAATTCTTGCAGTTGAGTTCGATACACGACAAAGTTCAACCGAAGATGGTCCAAACAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAACATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAATCATAAGAATTGAATATTTCAATGATGTAATATCTGTTTTTGGTTCAATGAATGTAAATTCACAAGATTCTATGGAGACTCTCTTGGTATCTCCAATTCTTAATCTCTCTTACTATTTTACGCAAGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAGTTACACTGAGCTAAACTGTGTAAAATCATGGGAGTTTGATGGTGTAGATATTGGTGATAAAAAAAGTGACTTGTGGATGTTGATTACAATACCAATAGTATTATTGATGATGATCATAGGTGGATTAGTCTTTTTCTTCCTTTATTTTCAAAGGAAAAAAAACTTAGAGATTGAAAAAGATACATATGGAGGGATAGAGGATCAAATTCAACACTCATCTTTGGCTCCAAAGAAATATCGACTAACGGAATTGATGAGAGCAACAGGTGGATTCAGCCATCAGAATAAACTTGGCGAAGGTGGATTTGGAATGGTTTATAAGGGTATTCTTCGAAACAACAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAATTCGCGTCAAGGAAAGCAAGAATTTATGGCAGAAGTTACAACAATTGGAAGCCTTCACCATAAAAACTTAGTGAAACTCGTCGGTTGGTGCTACGAAAGCAAAGAGCTTCTCCTTGTTTATGAGTTCATGCCTAAAGGAAGCTTAGACAAATACCTATTTAACCAATCAAGTGAATTAGAATTACAATATTCAAAAGTACTCGATTGGAAAACTAGGAATAGCGTGATTCGTGATGTAGCGCAAGCATTGGATTATCTTCATGATGGTTGTGAAAGAAGGGTACTCCATAGAGATATTAAAGCAAGCAATATAATGTTGGATTTAGATTACACAGCAAAATTAGGTGATTTTGGATTAGCGCGTACAGTTCAAAAGAGAAATGAAACTCATCACTCGACAAAGGAAATTGCAGGAACACCAGGTTATATGGCACCAGAAAGTTTTCTAACAGGAAGAGCGACAGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTAGAAGTTGTGTGTGGGAGAAGACCAGGAAATGTGTTTGCACAAGAGGATTATAAAAATAGTATTGTGTATCAAGTTTGGGAGCTTTTTGGAAAAGGTAAAATTGTTAGTGTTGTGGATAAAAGGATAAGTTGTGAAGAGCATGAGGTTGAGAGGGTAAAATGGGAAGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCATGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTAATGGTTCTAAATGGAGAAGTTTCTCCTCCAAATGTTCCAATGGAAAGACCTTCTTTTGTTTGGCCTGCCATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGAACACTCAGTCCATTCACTCAACTTAGTGGAAGATAG | 1995 | 0.3569 | MNFFSLLLTLIFTIIAFTKISCLNFNFTTFQPSDESYLLLSKNSKIYLNAIQITPDIRGEIMNYSGRAFYNIPYTLWNKNKIASFNTNFVLNIGPQTSPGGEGIAFVIASDTTLPENSDGQWLGIVNASTNGTYQARILAVEFDTRQSSTEDGPNNHVGININSISSLKQTSLSNTKVNLSSGKDVIIRIEYFNDVISVFGSMNVNSQDSMETLLVSPILNLSYYFTQEVYVGFSASTSSYTELNCVKSWEFDGVDIGDKKSDLWMLITIPIVLLMMIIGGLVFFFLYFQRKKNLEIEKDTYGGIEDQIQHSSLAPKKYRLTELMRATGGFSHQNKLGEGGFGMVYKGILRNNKEIAVKRVSKNSRQGKQEFMAEVTTIGSLHHKNLVKLVGWCYESKELLLVYEFMPKGSLDKYLFNQSSELELQYSKVLDWKTRNSVIRDVAQALDYLHDGCERRVLHRDIKASNIMLDLDYTAKLGDFGLARTVQKRNETHHSTKEIAGTPGYMAPESFLTGRATVETDVYAFGVLVLEVVCGRRPGNVFAQEDYKNSIVYQVWELFGKGKIVSVVDKRISCEEHEVERVKWEEEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPNVPMERPSFVWPAMPSSFKEGEDNSLINGTLSPFTQLSGR | 664 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02143 | 664 | Gene3D | Phosphorylase Kinase; domain 1 | 305 | 406 | - | - | |
Trre2g02143 | 664 | PANTHER | - | 49 | 624 | - | - | |
Trre2g02143 | 664 | CDD | STKc_IRAK | 337 | 619 | - | - | |
Trre2g02143 | 664 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 21 | 253 | IPR013320 | - | |
Trre2g02143 | 664 | FunFam | Probable L-type lectin-domain containing receptor kinase S.5 | 22 | 261 | - | - | |
Trre2g02143 | 664 | SUPERFAMILY | Protein kinase-like (PK-like) | 314 | 617 | IPR011009 | - | |
Trre2g02143 | 664 | Pfam | Protein tyrosine and serine/threonine kinase | 333 | 615 | IPR001245 | GO:0004672|GO:0006468 | |
Trre2g02143 | 664 | Gene3D | - | 21 | 262 | - | - | |
Trre2g02143 | 664 | CDD | lectin_legume_LecRK_Arcelin_ConA | 23 | 252 | IPR001220 | GO:0030246 | |
Trre2g02143 | 664 | FunFam | probable L-type lectin-domain containing receptor kinase S.5 | 407 | 623 | - | - | |
Trre2g02143 | 664 | Gene3D | Transferase(Phosphotransferase) domain 1 | 407 | 623 | - | - | |
Trre2g02143 | 664 | Pfam | Legume lectin domain | 23 | 256 | IPR001220 | GO:0030246 | |
Trre2g02143 | 664 | SMART | serkin_6 | 331 | 617 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02143 | 664 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g02143 | 664 | FunFam | Probable L-type lectin-domain containing receptor kinase S.5 | 316 | 406 | - | - | |
Trre2g02143 | 664 | ProSiteProfiles | Protein kinase domain profile. | 331 | 633 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g02143 | 664 | ProSitePatterns | Protein kinases ATP-binding region signature. | 337 | 359 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02143 | Trre-Chr2 | 17452641 | 17454635 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02143 | 3 | 633 | Receptor kinase-like Gene Family | AT5G55830 | 35.059 | 4.11e-119 | 369 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_L-LEC | Trre2g02143 | PK_Tyr_Ser-Thr | 1.3e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02143 | - | - | tpra:123883598 | 1040.02 |