Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02143 ATGAACTTCTTTTCCTTGCTATTAACACTCATATTCACTATCATAGCCTTTACCAAAATTAGTTGCTTGAATTTTAATTTCACAACCTTCCAACCAAGTGATGAATCCTATTTGTTACTAAGCAAAAACTCAAAAATATACTTAAATGCTATCCAAATAACACCAGATATTCGTGGTGAAATAATGAATTATTCTGGACGTGCTTTTTACAATATTCCATACACACTTTGGAACAAAAACAAAATTGCTTCTTTCAACACAAATTTTGTTCTCAACATAGGTCCTCAAACTTCACCTGGTGGAGAAGGCATAGCTTTTGTCATAGCTTCAGATACAACTCTCCCTGAAAACAGTGATGGACAATGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTATCAAGCCAGAATTCTTGCAGTTGAGTTCGATACACGACAAAGTTCAACCGAAGATGGTCCAAACAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAACATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAATCATAAGAATTGAATATTTCAATGATGTAATATCTGTTTTTGGTTCAATGAATGTAAATTCACAAGATTCTATGGAGACTCTCTTGGTATCTCCAATTCTTAATCTCTCTTACTATTTTACGCAAGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAGTTACACTGAGCTAAACTGTGTAAAATCATGGGAGTTTGATGGTGTAGATATTGGTGATAAAAAAAGTGACTTGTGGATGTTGATTACAATACCAATAGTATTATTGATGATGATCATAGGTGGATTAGTCTTTTTCTTCCTTTATTTTCAAAGGAAAAAAAACTTAGAGATTGAAAAAGATACATATGGAGGGATAGAGGATCAAATTCAACACTCATCTTTGGCTCCAAAGAAATATCGACTAACGGAATTGATGAGAGCAACAGGTGGATTCAGCCATCAGAATAAACTTGGCGAAGGTGGATTTGGAATGGTTTATAAGGGTATTCTTCGAAACAACAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAATTCGCGTCAAGGAAAGCAAGAATTTATGGCAGAAGTTACAACAATTGGAAGCCTTCACCATAAAAACTTAGTGAAACTCGTCGGTTGGTGCTACGAAAGCAAAGAGCTTCTCCTTGTTTATGAGTTCATGCCTAAAGGAAGCTTAGACAAATACCTATTTAACCAATCAAGTGAATTAGAATTACAATATTCAAAAGTACTCGATTGGAAAACTAGGAATAGCGTGATTCGTGATGTAGCGCAAGCATTGGATTATCTTCATGATGGTTGTGAAAGAAGGGTACTCCATAGAGATATTAAAGCAAGCAATATAATGTTGGATTTAGATTACACAGCAAAATTAGGTGATTTTGGATTAGCGCGTACAGTTCAAAAGAGAAATGAAACTCATCACTCGACAAAGGAAATTGCAGGAACACCAGGTTATATGGCACCAGAAAGTTTTCTAACAGGAAGAGCGACAGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTAGAAGTTGTGTGTGGGAGAAGACCAGGAAATGTGTTTGCACAAGAGGATTATAAAAATAGTATTGTGTATCAAGTTTGGGAGCTTTTTGGAAAAGGTAAAATTGTTAGTGTTGTGGATAAAAGGATAAGTTGTGAAGAGCATGAGGTTGAGAGGGTAAAATGGGAAGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCATGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTAATGGTTCTAAATGGAGAAGTTTCTCCTCCAAATGTTCCAATGGAAAGACCTTCTTTTGTTTGGCCTGCCATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGAACACTCAGTCCATTCACTCAACTTAGTGGAAGATAG 1995 0.3569 MNFFSLLLTLIFTIIAFTKISCLNFNFTTFQPSDESYLLLSKNSKIYLNAIQITPDIRGEIMNYSGRAFYNIPYTLWNKNKIASFNTNFVLNIGPQTSPGGEGIAFVIASDTTLPENSDGQWLGIVNASTNGTYQARILAVEFDTRQSSTEDGPNNHVGININSISSLKQTSLSNTKVNLSSGKDVIIRIEYFNDVISVFGSMNVNSQDSMETLLVSPILNLSYYFTQEVYVGFSASTSSYTELNCVKSWEFDGVDIGDKKSDLWMLITIPIVLLMMIIGGLVFFFLYFQRKKNLEIEKDTYGGIEDQIQHSSLAPKKYRLTELMRATGGFSHQNKLGEGGFGMVYKGILRNNKEIAVKRVSKNSRQGKQEFMAEVTTIGSLHHKNLVKLVGWCYESKELLLVYEFMPKGSLDKYLFNQSSELELQYSKVLDWKTRNSVIRDVAQALDYLHDGCERRVLHRDIKASNIMLDLDYTAKLGDFGLARTVQKRNETHHSTKEIAGTPGYMAPESFLTGRATVETDVYAFGVLVLEVVCGRRPGNVFAQEDYKNSIVYQVWELFGKGKIVSVVDKRISCEEHEVERVKWEEEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPNVPMERPSFVWPAMPSSFKEGEDNSLINGTLSPFTQLSGR 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02143 664 Gene3D Phosphorylase Kinase; domain 1 305 406 - -
Trre2g02143 664 PANTHER - 49 624 - -
Trre2g02143 664 CDD STKc_IRAK 337 619 - -
Trre2g02143 664 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 253 IPR013320 -
Trre2g02143 664 FunFam Probable L-type lectin-domain containing receptor kinase S.5 22 261 - -
Trre2g02143 664 SUPERFAMILY Protein kinase-like (PK-like) 314 617 IPR011009 -
Trre2g02143 664 Pfam Protein tyrosine and serine/threonine kinase 333 615 IPR001245 GO:0004672|GO:0006468
Trre2g02143 664 Gene3D - 21 262 - -
Trre2g02143 664 CDD lectin_legume_LecRK_Arcelin_ConA 23 252 IPR001220 GO:0030246
Trre2g02143 664 FunFam probable L-type lectin-domain containing receptor kinase S.5 407 623 - -
Trre2g02143 664 Gene3D Transferase(Phosphotransferase) domain 1 407 623 - -
Trre2g02143 664 Pfam Legume lectin domain 23 256 IPR001220 GO:0030246
Trre2g02143 664 SMART serkin_6 331 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02143 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Trre2g02143 664 FunFam Probable L-type lectin-domain containing receptor kinase S.5 316 406 - -
Trre2g02143 664 ProSiteProfiles Protein kinase domain profile. 331 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02143 664 ProSitePatterns Protein kinases ATP-binding region signature. 337 359 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02143 Trre-Chr2 17452641 17454635 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02143 3 633 Receptor kinase-like Gene Family AT5G55830 35.059 4.11e-119 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02143 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02143 - - tpra:123883598 1040.02