Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02142 ATGAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACACACTTCGGAACAAAAACAAAATTGCTTTTTTCAACACAACTTTTGTTCTCAACATAGGTCCTCAAACTTCCCCTGGTGGAGAAGGAATAGCTTTTATCTTAGCTTCAGATACAACTCTCCCTGAAAACAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACAAATGGAACTCCTCGAGCCGCAATTCTTGCAGTTGAATTTGATACACGACAGAGTTCAACCGAAGACGGTCCAAATAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAACTATAAGAATTGAATATTTGAAAGATGTAATAACTGTTTCTGGTTCAATGACTGAAAAATATTTAGTTGATCCTATGGATACACTTTTGGTATCTCCACCTCTTAATCTCTCTTCCTATTTTAAACAAGAGGTTTATGTTGGATTTTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTGTAAAATCATGGGAATTCAATGGTGTAGATATTGGTAATAAAAGAAATCTCTTGTGGATTTGGATTATAATTCCATTGGTCATAATCATAAGTGGATTAGTCCTTTTAATAGTATATTTTCTAAGGAAAAAAAACATGGAGATTCAAGAAGATACATATCCGAGGATAGAGGATCAAATTAAAAATTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGAAGAAAGCAACAGGTGGATTCAGCCAGCAAAACAAACTTGGTGAAGGAGGATTTGGAACGGTTTATAAGGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAGATGAAACTCATCATTCAACAAAGGAAATTGCTGGGACACCAGGTTATATGGCACCCGAAACTTTTTTAACCGGAAGAGCAACAGTTGAAACAGATGTTTACGGATTTGGTGTACTTGTTTTGGAAGTTGTGTGTAGAAAAACACCAGGAAATGTGTATGCACAAGATGATTATAAAAATAGTATTGTGTATTGGGTTTGGGAGCTTTATGGAAAAGGCGAAATTGTTAGTGCTGCTGATAAAAGGATAAGTTATGAAGAGGAAGAAGTTGAAACTGTGCTTGTTCTTGGGTTGGCTTGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAGTTTCTCCTCCAAATGTTCCAATGGAAAGACCTTCTTTTGTTTGGCCCGCTTTGCCTTCATCTTTCAAACAAGGTGAAGATAATTCTCTTGTCAATGGAACTCTCACTCCATTCTCTGAACTTAGTGGCAGATAG 1386 0.3608 MNYSGRAFYKKPYTLRNKNKIAFFNTTFVLNIGPQTSPGGEGIAFILASDTTLPENSSGQWLGIVNASTNGTPRAAILAVEFDTRQSSTEDGPNNHVGININSISSLKQASLSNTKVNLSSGKDVTIRIEYLKDVITVSGSMTEKYLVDPMDTLLVSPPLNLSSYFKQEVYVGFSASTSNYTELNCVKSWEFNGVDIGNKRNLLWIWIIIPLVIIISGLVLLIVYFLRKKNMEIQEDTYPRIEDQIKNSSMAPKKYQLKELKKATGGFSQQNKLGEGGFGTVYKGDFGLARTIQKRDETHHSTKEIAGTPGYMAPETFLTGRATVETDVYGFGVLVLEVVCRKTPGNVYAQDDYKNSIVYWVWELYGKGEIVSAADKRISYEEEEVETVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPNVPMERPSFVWPALPSSFKQGEDNSLVNGTLTPFSELSGR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02142 461 Gene3D Transferase(Phosphotransferase) domain 1 268 432 - -
Trre2g02142 461 CDD lectin_legume_LecRK_Arcelin_ConA 4 193 IPR001220 GO:0030246
Trre2g02142 461 ProSiteProfiles Protein kinase domain profile. 30 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02142 461 SUPERFAMILY Protein kinase-like (PK-like) 285 433 IPR011009 -
Trre2g02142 461 SUPERFAMILY Protein kinase-like (PK-like) 250 285 IPR011009 -
Trre2g02142 461 Gene3D - 1 202 - -
Trre2g02142 461 Pfam Protein kinase domain 286 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02142 461 PANTHER - 285 421 - -
Trre2g02142 461 Pfam Legume lectin domain 4 197 IPR001220 GO:0030246
Trre2g02142 461 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 193 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02142 Trre-Chr2 17447708 17449486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02142 285 422 Receptor kinase-like Gene Family AT3G45430 40.000 1.99e-21 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02142 Lectin_legB 1.6e-54 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02142 - - tpra:123883598 397.897