Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02141 ATGTCTTTGCTACTTAAATATCAAATACTAGCAATCATATTCACTATCATATCCCTTACAAAAATTAGTTGCTTTTATTTCAATTTCCCAACCTTCCAACCAAATGATGAATATTCCAATTTGTTACTAAGCAAAAACTCAAAAATATACTTAGATGCTATCCAAGTAACCCCAGATATTCGTGGTGAAATAATGAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACACACTTCGGAACAAAAACAAAATTGCTTTTTTCAACACAACTTTTGTTCTCAACATAGGTCCTCAAACTTCCCCTGGTGGAGAAGGAATAGCTTTTATCTTAGCTTCAGATACAACTCTCCCTGAAAACAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACAAATGGAACTCCTCGAGCCGCAATTCTTGCAGTTGAATTTGATACACGACAGAGTTCAACCGAAGACGGTCCAAATAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTAAAGATGTAACTATAAGAATTGAATATTTGAAAGATGTAATAACTGTTTCTGGTTCAATGACTGAAAAATATTTAGTTGATCCTATGGATACACTTTTGGTATCTCCACCTCTTAATCTCTCTTCCTATTTTAAACAAGAGGTTTATGTTGGATTTTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTGTAAAATCATGGGAATTCAATGGTGTAGATATTGGTAATAAAAGAAATCTCTTGTGGATTTGGATTATAATTCCATTGGTCATAATCATAAGTGGATTAGTCCTTTTAATAGTATATTTTCTAAGGAAAAAAAACATGGAGATTCAAGAAGATACATATCCGAGGATAGAGGATCAAATTAAAAATTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGAAGAAAGCAACAGGTGGATTCAGCCAGCAAAACAAACTTGGTGAAGGAGGATTTGGAACGGTTTATAAGGGTATTCTTCGAAACAACAAAGAAATAGCTGTGAAGAGAGTTTTGAAGAACTCGAGTAAAGGAAAGCAAGAATTTATAGCAGAAGTTACAACAATTGGAAGCCTTCACCACAAAAACTTGGTGAAACTCATCGGTTGGTGCTACGAAAGCAAAGAGCTTCTCCTTGTATACGAGTTTATGCCTCGGGGAAGTTTAGATAAATACTTGTATAACCAATCAAGTGAATTAGAAGTACAATATTCACAAGTACTAGATTGGAAAACAAGAAATAGCGTGATTCGTGATGTCGCCCAAGCGTTGGATTATCTTCACAATGGATGTGAGAAAAGAGTACTTCATAGAGACATTAAAGCAAGCAACATAATGTTGGACTTGGACTACATCGCAAAATTAGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAGATGAAACTCATCATTCAACAAAGGAAATTGCTGGGACACCAGGTTATATGGCACCCGAAACTTTTTTAACCGGAAGAGCAACAGTTGAAACAGATGTTTACGGATTTGGTGTACTTGTTTTGGAAGTTGTGTGTAGAAAAACACCAGGAAATGTGTATGCACAAGATGATTATAAAAATAGTATTGTGTATTGGGTTTGGGAGCTTTATGGAAAAGGCGAAATTGTTAGTGCTGCTGATAAAAGGATAAGTTATGAAGAGGAAGAAGTTGAAACTGTGCTTGTTCTTGGGTTGGCTTGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAGTTTCTCCTCCAAATGTTCCAATGGAAAGACCTTCTTTTGTTTGGCCCGCTTTGCCTTCATCTTTCAAACAAGGTGAAGATAATTCTCTTGTCAATGGAACTCTCACTCCATTCTCTGAACTTAGTGGCAGATAG 1971 0.3567 MSLLLKYQILAIIFTIISLTKISCFYFNFPTFQPNDEYSNLLLSKNSKIYLDAIQVTPDIRGEIMNYSGRAFYKKPYTLRNKNKIAFFNTTFVLNIGPQTSPGGEGIAFILASDTTLPENSSGQWLGIVNASTNGTPRAAILAVEFDTRQSSTEDGPNNHVGININSISSLKQASLSNTKVNLSSGKDVTIRIEYLKDVITVSGSMTEKYLVDPMDTLLVSPPLNLSSYFKQEVYVGFSASTSNYTELNCVKSWEFNGVDIGNKRNLLWIWIIIPLVIIISGLVLLIVYFLRKKNMEIQEDTYPRIEDQIKNSSMAPKKYQLKELKKATGGFSQQNKLGEGGFGTVYKGILRNNKEIAVKRVLKNSSKGKQEFIAEVTTIGSLHHKNLVKLIGWCYESKELLLVYEFMPRGSLDKYLYNQSSELEVQYSQVLDWKTRNSVIRDVAQALDYLHNGCEKRVLHRDIKASNIMLDLDYIAKLGDFGLARTIQKRDETHHSTKEIAGTPGYMAPETFLTGRATVETDVYGFGVLVLEVVCRKTPGNVYAQDDYKNSIVYWVWELYGKGEIVSAADKRISYEEEEVETVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPNVPMERPSFVWPALPSSFKQGEDNSLVNGTLTPFSELSGR 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02141 656 ProSitePatterns Protein kinases ATP-binding region signature. 338 364 IPR017441 GO:0005524
Trre2g02141 656 Gene3D Phosphorylase Kinase; domain 1 293 407 - -
Trre2g02141 656 FunFam Probable L-type lectin-domain containing receptor kinase S.5 317 407 - -
Trre2g02141 656 PANTHER - 55 616 - -
Trre2g02141 656 FunFam probable L-type lectin-domain containing receptor kinase S.5 408 615 - -
Trre2g02141 656 Pfam Protein kinase domain 333 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02141 656 Gene3D Transferase(Phosphotransferase) domain 1 408 615 - -
Trre2g02141 656 FunFam Probable L-type lectin-domain containing receptor kinase S.5 24 265 - -
Trre2g02141 656 Pfam Legume lectin domain 27 260 IPR001220 GO:0030246
Trre2g02141 656 ProSiteProfiles Protein kinase domain profile. 332 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02141 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 257 IPR013320 -
Trre2g02141 656 CDD STKc_IRAK 338 611 - -
Trre2g02141 656 SUPERFAMILY Protein kinase-like (PK-like) 314 609 IPR011009 -
Trre2g02141 656 Gene3D - 23 265 - -
Trre2g02141 656 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Trre2g02141 656 SMART serkin_6 332 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02141 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02141 Trre-Chr2 17447708 17449678 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02141 5 625 Receptor kinase-like Gene Family AT5G55830 35.746 1.63e-117 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02141 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02141 - - tpra:123883598 986.482