Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02136 ATGTCCAATTTAGCAGGACGTGCTTTATACAAAGATCCATTCAAAATTGCTTCTTTCAACACCACTTTTGTTCTCAATATAACACCTAAAACTTCCCCTGGTGGAGGAGAAGGCATAGCTTTTATCTTAGCTTCAGATCCAACTCTCCCTGAAAACAGTGATGGACACTGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTCTCGAGCCGCAATTCTTGCAGTTGAGTTCGATACACGACAGAGTTCAACCGAAGACGGTCCAAACAACCATGTTGGAATCAACATAAATAGTATCTCCTCAATCATACAAGCATCATTATCAGATACTAAGGTTAATCTTACATCTAGTACAAATGTGTTTATAAGAGTTGAATATTCTAATGATGTGATATCTGTTTTTGGTTCAATGACTGAAAATTCAAATGATTCTATGGAGACCCTTTTGGTATCTCCAACTCTCAATCTCTCTTCTTATTTTAAAGACGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTTTGAGAGCATGGGAATTCATTAGTGTAGATATTGGTAATAAAAAAAATTACTTGTGGATTTGGATTATAATTCCATTGGTCATAATCATAGGTGGATTAGTCTTTTTCATGGTATATTTTCTAAGGAAAAAAAACATGGAGCTTCAAGAAGATACATATAAAGGGATAGAAGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGATGAAAGCAACAGGTGGATTCAGCCCTCAGAATAAACTTGGCGAAGGTGGATTTGGAATGGTTTATAAGGGTATTCTTGGAAACAATAAAGAGATAGCTGTGAAGAGAGTTTCAAAGAACTCGCGCCAGGGAAAACAAGAATTTATGGCAGAAGTTACAACAATTGGAAGCCTTCACCACAAAAACTTGGTGAAACTCATCGGTTGGTGCTACGAAAGCAAAGACAAAGAGCTTCTCCTTGTTTACGAGTTTATGCCAAAAGGAAGTTTGGATAAATACTTATTTAACCAATCGAGTGAATTAGAATTACAATATTCAAAAGTTCTTGATTGGAAAACAAGAAATAGTGTGATTCGTGATGTTGCTCAAGCATTGGATTATCTTCACAATGGATGTGAGAAAAGAGTACTTCATAGAGACATTAAAGCAAGCAACATAATCTTGGATTTAGATTACGTCGCAAAATTGGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAAATGAAACTCATCATTCAACAAAGGGAATTGCTGGAACACCAGGTTATATGGCACCTGAAACTTTTTTAACCGGAAGAGCGACAATCGAAACAGATGTGTATGCATTTGGTGTTCTTGTTTTAGAAGTTGTGTGTGGAAGAAGACCTGGAAATGTGTATGCCCAAGATGAATATAATAATAGTATTGTGTATTGGGTTTGGGAGCTTTACGGAAAAGGCGAAATTGTTAGTGTTGTGGATCAAAGAATAAGTTCTGAAGAGAATGAAGTTGAGAGGGTAAAGTGGGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCTTGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAGTTTCTCCTCCGGCTGTTCCAATGGAAAGACCTTCTTTTGTATGGCCTGCTATGCCTTCATCTTTCAAACATTGCGAAGATAGCTCGCTTACCAGTGGAACTCTCACTCCTATCACTGAAGTTAGTGGCAGATAG 1794 0.3707 MSNLAGRALYKDPFKIASFNTTFVLNITPKTSPGGGEGIAFILASDPTLPENSDGHWLGIVNASTNGTSRAAILAVEFDTRQSSTEDGPNNHVGININSISSIIQASLSDTKVNLTSSTNVFIRVEYSNDVISVFGSMTENSNDSMETLLVSPTLNLSSYFKDEVYVGFSASTSNYTELNCLRAWEFISVDIGNKKNYLWIWIIIPLVIIIGGLVFFMVYFLRKKNMELQEDTYKGIEDQIQHSSMAPKKYQLKELMKATGGFSPQNKLGEGGFGMVYKGILGNNKEIAVKRVSKNSRQGKQEFMAEVTTIGSLHHKNLVKLIGWCYESKDKELLLVYEFMPKGSLDKYLFNQSSELELQYSKVLDWKTRNSVIRDVAQALDYLHNGCEKRVLHRDIKASNIILDLDYVAKLGDFGLARTIQKRNETHHSTKGIAGTPGYMAPETFLTGRATIETDVYAFGVLVLEVVCGRRPGNVYAQDEYNNSIVYWVWELYGKGEIVSVVDQRISSEENEVERVKWEEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPAVPMERPSFVWPAMPSSFKHCEDSSLTSGTLTPITEVSGR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02136 597 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 235 340 - -
Trre2g02136 597 Gene3D - 1 200 - -
Trre2g02136 597 FunFam probable L-type lectin-domain containing receptor kinase S.5 341 556 - -
Trre2g02136 597 ProSiteProfiles Protein kinase domain profile. 263 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02136 597 ProSitePatterns Protein kinases ATP-binding region signature. 269 291 IPR017441 GO:0005524
Trre2g02136 597 Gene3D Transferase(Phosphotransferase) domain 1 341 555 - -
Trre2g02136 597 SMART serkin_6 263 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02136 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Trre2g02136 597 Gene3D Phosphorylase Kinase; domain 1 237 340 - -
Trre2g02136 597 Pfam Legume lectin domain 5 194 IPR001220 GO:0030246
Trre2g02136 597 CDD lectin_legume_LecRK_Arcelin_ConA 1 189 IPR001220 GO:0030246
Trre2g02136 597 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 190 IPR013320 -
Trre2g02136 597 Pfam Protein tyrosine and serine/threonine kinase 266 548 IPR001245 GO:0004672|GO:0006468
Trre2g02136 597 CDD STKc_IRAK 269 552 - -
Trre2g02136 597 PANTHER - 5 560 - -
Trre2g02136 597 SUPERFAMILY Protein kinase-like (PK-like) 245 550 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02136 Trre-Chr2 17413224 17415017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02136 16 562 Receptor kinase-like Gene Family AT3G53810 38.021 4.00e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02136 PK_Tyr_Ser-Thr 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02136 - - tpra:123883598 960.288