Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02135 ATGTCCAATTTAGCAGGACGTGCTTTATACAAAGATCCATTCAAAATTGCTTCTTTCAACACCACTTTTGTTCTCAATATAACACCTAAAACTTCCCCTGGTGGAGGAGAAGGCATAGCTTTTATCTTAGCTTCAGATCCAACTCTCCCTGAAAACAGTGATGGACACTGGCTTGGTATTGTAAATGCTTCCACTAATGGAACTTCTCGAGCCGCAATTCTTGCAGTTGAGTTCGATACACGACAGAGTTCAACCGAAGACGGTCCAAACAACCATGTTGGAATCAACATAAATAGTATCTCCTCAATCATACAAGCATCATTATCAGATACTAAGGTTAATCTTACATCTAGTACAAATGTGTTTATAAGAGTTGAATATTCTAATGATGTGATATCTGTTTTTGGTTCAATGACTGAAAATTCAAATGATTCTATGGAGACCCTTTTGGTATCTCCAACTCTCAATCTCTCTTCTTATTTTAAAGACGAGGTTTATGTCGGTTTCTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTTTGAGAGCATGGGAATTCATTAGTGTAGATATTGGTAATAAAAAAAATTACTTGTGGATTTGGATTATAATTCCATTGGTCATAATCATAGGTGGATTAGTCTTTTTCATGGTATATTTTCTAAGGAAAAAAAACATGGAGCTTCAAGAAGATACATATAAAGGGATAGAAGATCAAATTCAACACTCATCTATGGCTCCAAAGAAATATCAACTAAAGGAATTGATGAAAGCAACAGGTGGATTCAGCCCTCAGAATAAACTTGGCGAAGGTGGATTTGGAATGGTTTATAAGGATTACGTCGCAAAATTGGGTGATTTTGGATTGGCGCGTACAATTCAAAAGAGAAATGAAACTCATCATTCAACAAAGGGAATTGCTGGAACACCAGGTTATATGGCACCTGAAACTTTTTTAACCGGAAGAGCGACAATCGAAACAGATGTGTATGCATTTGGTGTTCTTGTTTTAGAAGTTGTGTGTGGAAGAAGACCTGGAAATGTGTATGCCCAAGATGAATATAATAATAGTATTGTGTATTGGGTTTGGGAGCTTTACGGAAAAGGCGAAATTGTTAGTGTTGTGGATCAAAGAATAAGTTCTGAAGAGAATGAAGTTGAGAGGGTAAAGTGGGAAGAAATTGAAATTGTGCTTGTTCTTGGTTTGGCTTGTTGTCATCCAAATCCAAATGAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAGTTTCTCCTCCGGCTGTTCCAATGGAAAGACCTTCTTTTGTATGGCCTGCTATGCCTTCATCTTTCAAACATTGCGAAGATAGCTCGCTTACCAGTGGAACTCTCACTCCTATCACTGAAGTTAGTGGCAGATAG 1413 0.3744 MSNLAGRALYKDPFKIASFNTTFVLNITPKTSPGGGEGIAFILASDPTLPENSDGHWLGIVNASTNGTSRAAILAVEFDTRQSSTEDGPNNHVGININSISSIIQASLSDTKVNLTSSTNVFIRVEYSNDVISVFGSMTENSNDSMETLLVSPTLNLSSYFKDEVYVGFSASTSNYTELNCLRAWEFISVDIGNKKNYLWIWIIIPLVIIIGGLVFFMVYFLRKKNMELQEDTYKGIEDQIQHSSMAPKKYQLKELMKATGGFSPQNKLGEGGFGMVYKDYVAKLGDFGLARTIQKRNETHHSTKGIAGTPGYMAPETFLTGRATIETDVYAFGVLVLEVVCGRRPGNVYAQDEYNNSIVYWVWELYGKGEIVSVVDQRISSEENEVERVKWEEIEIVLVLGLACCHPNPNERPSMKTVLMVLNGEVSPPAVPMERPSFVWPAMPSSFKHCEDSSLTSGTLTPITEVSGR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02135 470 PANTHER - 280 433 - -
Trre2g02135 470 Gene3D - 1 200 - -
Trre2g02135 470 ProSiteProfiles Protein kinase domain profile. 58 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02135 470 SUPERFAMILY Protein kinase-like (PK-like) 280 448 IPR011009 -
Trre2g02135 470 CDD lectin_legume_LecRK_Arcelin_ConA 1 189 IPR001220 GO:0030246
Trre2g02135 470 SUPERFAMILY Concanavalin A-like lectins/glucanases 3 190 IPR013320 -
Trre2g02135 470 Pfam Legume lectin domain 5 194 IPR001220 GO:0030246
Trre2g02135 470 Gene3D Transferase(Phosphotransferase) domain 1 259 440 - -
Trre2g02135 470 FunFam Lectin-domain containing receptor kinase A4.3 275 442 - -
Trre2g02135 470 Pfam Protein tyrosine and serine/threonine kinase 276 421 IPR001245 GO:0004672|GO:0006468
Trre2g02135 470 SMART serkin_6 176 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02135 Trre-Chr2 17413224 17415017 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02135 276 439 Receptor kinase-like Gene Family AT5G55830 41.463 6.87e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02135 Lectin_legB 3.9e-48 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02135 - - tpra:123883598 403.29