Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02134 ATGAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACACACTTTGGAACAAAAACAAAATTGCTTTTTTCAACACAACTTTTGTTCTCAACATAGGTCCTCAAACTTCCCCTGGTGGAGAAGGAATAGCTTTTATCTTAGCTTCAGATACAACTCTCCCTGAAAACAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACAAATGGAACTTCTCGAGCCGCAATTCTTGCAGTTGAATTTGATACACGACAGAGTTCAACCGAAGACGGTCCAAATAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTATAAATGTAACTATAAGAATTGAATATTTCAATGATGTAATATCTGTTTTTGGTTCAATGAGTGTAAATTCACATGATTCTATGGAGACCCTTTTGGTATCTCCACCTCTTAACCTCTCTTCTTATCTTAAACAAGAGGTTTATGTTGGATTCTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTGTGAGAGCATGGGAATTCAATGGTGTAGATATTGGTAATAAAAAAAATCTCTTGTGGATTTGGATTATGATTCCATTGGTCATGATCATAGGTGGATTAGTCCTTTTCATGGTATATTTTCTAAGGAAAAAAAACATGGAGATTCAAGAAGATACGTATCCGAGGATAGAGGATCAAATTCAACACTCATCTATGGCTCCGAAGAAATATCAATTAAAGGAATTGATGAAAGCGACCGGTGGATTCAGCCATCAGAACAAACTTGGTGAAGGTGGATTTGGAACGGTTTATAAGGGAGATTTTGGATTAGCGCGTACAATTCAAAAGAGAAATGAAACTCATCACTCCACAAAGGAAATTGCGGGGACGCCAGGTTATATGGCACCAGAAACTTTTCTGACAGGAAGAGCAACGGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTGGAAGTAGTGTGTGCAAAAAGACCGGGGAATATGTATGCACAAGATGATTATAAAAATAGTATTGTCTATTGGGTTTGGGAGCTTTATGGAAAAGGCGAAATTGTTAGCGCCGTGGACAAAAGGATAAGTTATGAAGAGAATGAGATTGAGAGGGTAAAATGGGAAGAAAAAGAAGTTGAGATTGAAAGGATAAAATTGGAGGAAGAAATTGAAATTGTGCTTATTCTTGGTTTGGCTTGTTGTCATCCAAATCCAAATCAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAATTTCTCCTCCAAATGTTTCATTGGATAGACCTGCTTTTGTTTGGCCAGCTATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGAACTCTCACTCCATTCACTCAACTTAGTGGCAGATAG 1446 0.3707 MNYSGRAFYKKPYTLWNKNKIAFFNTTFVLNIGPQTSPGGEGIAFILASDTTLPENSSGQWLGIVNASTNGTSRAAILAVEFDTRQSSTEDGPNNHVGININSISSLKQASLSNTKVNLSSGINVTIRIEYFNDVISVFGSMSVNSHDSMETLLVSPPLNLSSYLKQEVYVGFSASTSNYTELNCVRAWEFNGVDIGNKKNLLWIWIMIPLVMIIGGLVLFMVYFLRKKNMEIQEDTYPRIEDQIQHSSMAPKKYQLKELMKATGGFSHQNKLGEGGFGTVYKGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCAKRPGNMYAQDDYKNSIVYWVWELYGKGEIVSAVDKRISYEENEIERVKWEEKEVEIERIKLEEEIEIVLILGLACCHPNPNQRPSMKTVLMVLNGEISPPNVSLDRPAFVWPAMPSSFKEGEDNSLINGTLTPFTQLSGR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02134 481 Pfam Legume lectin domain 4 198 IPR001220 GO:0030246
Trre2g02134 481 PANTHER - 284 438 - -
Trre2g02134 481 Pfam Protein kinase domain 285 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02134 481 SUPERFAMILY Protein kinase-like (PK-like) 247 284 IPR011009 -
Trre2g02134 481 Gene3D Transferase(Phosphotransferase) domain 1 242 449 - -
Trre2g02134 481 SUPERFAMILY Concanavalin A-like lectins/glucanases 2 193 IPR013320 -
Trre2g02134 481 Gene3D - 1 201 - -
Trre2g02134 481 Coils Coil 385 405 - -
Trre2g02134 481 CDD lectin_legume_LecRK_Arcelin_ConA 4 192 IPR001220 GO:0030246
Trre2g02134 481 SUPERFAMILY Protein kinase-like (PK-like) 284 451 IPR011009 -
Trre2g02134 481 ProSiteProfiles Protein kinase domain profile. 62 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02134 Trre-Chr2 17408285 17410123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02134 284 444 Receptor kinase-like Gene Family AT5G60300 35.404 3.39e-20 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02134 Lectin_legB 9.9e-55 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02134 - - tpra:123883598 441.425