Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02133 ATGTCTTTGCTACTTAAATATCAAATACTAGCAATCATATTCACTATCACATCCCTTACAAAAATTAGTTGCTTTTATTTCAATTTCCCAACCTTCCAACCAAATGATGAATATTCCAATTTGTTACTAAGCAAAAACTCAAAAATATACTTAGATGCTATCCAAGTAACCCCAGATATTCGTGGTGAAATAATGAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACACACTTTGGAACAAAAACAAAATTGCTTTTTTCAACACAACTTTTGTTCTCAACATAGGTCCTCAAACTTCCCCTGGTGGAGAAGGAATAGCTTTTATCTTAGCTTCAGATACAACTCTCCCTGAAAACAGTTCAGGACAATGGCTTGGTATTGTAAATGCTTCCACAAATGGAACTTCTCGAGCCGCAATTCTTGCAGTTGAATTTGATACACGACAGAGTTCAACCGAAGACGGTCCAAATAACCATGTTGGAATCAATATAAACAGCATATCTTCATTGAAACAAGCATCATTATCAAACACTAAGGTGAATCTTTCATCTGGTATAAATGTAACTATAAGAATTGAATATTTCAATGATGTAATATCTGTTTTTGGTTCAATGAGTGTAAATTCACATGATTCTATGGAGACCCTTTTGGTATCTCCACCTCTTAACCTCTCTTCTTATCTTAAACAAGAGGTTTATGTTGGATTCTCTGCTTCAACAAGCAATTACACAGAGCTAAACTGTGTGAGAGCATGGGAATTCAATGGTGTAGATATTGGTAATAAAAAAAATCTCTTGTGGATTTGGATTATGATTCCATTGGTCATGATCATAGGTGGATTAGTCCTTTTCATGGTATATTTTCTAAGGAAAAAAAACATGGAGATTCAAGAAGATACGTATCCGAGGATAGAGGATCAAATTCAACACTCATCTATGGCTCCGAAGAAATATCAATTAAAGGAATTGATGAAAGCGACCGGTGGATTCAGCCATCAGAACAAACTTGGTGAAGGTGGATTTGGAACGGTTTATAAGGGAGATTTTGGATTAGCGCGTACAATTCAAAAGAGAAATGAAACTCATCACTCCACAAAGGAAATTGCGGGGACGCCAGGTTATATGGCACCAGAAACTTTTCTGACAGGAAGAGCAACGGTCGAAACAGATGTGTATGCATTTGGTGTACTTGTTTTGGAAGTAGTGTGTGCAAAAAGACCGGGGAATATGTATGCACAAGATGATTATAAAAATAGTATTGTCTATTGGGTTTGGGAGCTTTATGGAAAAGGCGAAATTGTTAGCGCCGTGGACAAAAGGATAAGTTATGAAGAGAATGAGATTGAGAGGGTAAAATGGGAAGAAAAAGAAGTTGAGATTGAAAGGATAAAATTGGAGGAAGAAATTGAAATTGTGCTTATTCTTGGTTTGGCTTGTTGTCATCCAAATCCAAATCAAAGGCCATCAATGAAAACTGTTTTGATGGTTCTAAATGGAGAAATTTCTCCTCCAAATGTTTCATTGGATAGACCTGCTTTTGTTTGGCCAGCTATGCCTTCATCTTTCAAAGAAGGTGAAGATAATTCTCTTATCAATGGAACTCTCACTCCATTCACTCAACTTAGTGGCAGATAG 1638 0.3626 MSLLLKYQILAIIFTITSLTKISCFYFNFPTFQPNDEYSNLLLSKNSKIYLDAIQVTPDIRGEIMNYSGRAFYKKPYTLWNKNKIAFFNTTFVLNIGPQTSPGGEGIAFILASDTTLPENSSGQWLGIVNASTNGTSRAAILAVEFDTRQSSTEDGPNNHVGININSISSLKQASLSNTKVNLSSGINVTIRIEYFNDVISVFGSMSVNSHDSMETLLVSPPLNLSSYLKQEVYVGFSASTSNYTELNCVRAWEFNGVDIGNKKNLLWIWIMIPLVMIIGGLVLFMVYFLRKKNMEIQEDTYPRIEDQIQHSSMAPKKYQLKELMKATGGFSHQNKLGEGGFGTVYKGDFGLARTIQKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCAKRPGNMYAQDDYKNSIVYWVWELYGKGEIVSAVDKRISYEENEIERVKWEEKEVEIERIKLEEEIEIVLILGLACCHPNPNQRPSMKTVLMVLNGEISPPNVSLDRPAFVWPAMPSSFKEGEDNSLINGTLTPFTQLSGR 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02133 545 CDD lectin_legume_LecRK_Arcelin_ConA 25 256 IPR001220 GO:0030246
Trre2g02133 545 ProSiteProfiles Protein kinase domain profile. 126 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02133 545 Pfam Legume lectin domain 27 262 IPR001220 GO:0030246
Trre2g02133 545 Pfam Protein kinase domain 349 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02133 545 Gene3D Transferase(Phosphotransferase) domain 1 306 513 - -
Trre2g02133 545 Coils Coil 449 469 - -
Trre2g02133 545 FunFam Probable L-type lectin-domain containing receptor kinase S.5 24 264 - -
Trre2g02133 545 PANTHER - 55 348 - -
Trre2g02133 545 SUPERFAMILY Protein kinase-like (PK-like) 348 521 IPR011009 -
Trre2g02133 545 Gene3D - 23 265 - -
Trre2g02133 545 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 256 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02133 Trre-Chr2 17408285 17410315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02133 348 508 Receptor kinase-like Gene Family AT5G60300 35.404 3.51e-20 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre2g02133 Lectin_legB 2.3e-60 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02133 - - gmx:100785031 503.442