Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02129 ATGTTTTCTTGGTTAACAAGATTAGTTTCATCGTGCTTGAGACCAGTGAGACGATATGCACGTATGAACAAAGATATTGAAAATGATTTTGATGTATCTTCAACATCTGAAGATGCTCTTGTTTGGTGTAAAGACCTTGAGAAACACTCATGTGGTGAATTCTCTTTTGCTATTGTTCAAGCTAATGAAGTAATTGAAGATCATAGTCAAGTTGAAACTGGTTCTGATTCTGTATTTGTTGGTGTTTATGATGGACATGGTGGTCCTGATGCTTCTCGGTTTGTTAATGATCACCTCTTTAATCATCTCATCAGGATTGCAAAAGAAAATGATTCTATCTCCGAAGATATTATAAGGAATGCTGTTACTGCTACGGAGGATGGATTTATGAATCTTGTTCGAAGGAGCTTCGGAATAAAGCCACTGATAGCAGCAATGGGTTCTTGTTGTCTCGTTGGTGTTATCTGGAAAGGGACGTTATATATCGCTAATCTTGGAGACTCTCGAGCTGTGATCGGTTCAATTGGTCGATCCAACAAGATCGTTGCTAAACAGTTGACCAAAGAGCACAATGCCTGCAAAGCAGATATCAGAAGAGAACTTAGGTCTTTGCATCCAGAAGATTCGCAAATTGTTGTTATGAAACATGGAACATGGCGCATTAAAGGCATCATCCAGGTATCAAGATCTATAGGAGATGCATATTTGAAACGGCCGGAGTTTTCCTTTGATCCATCATTCCCGAAGTTCCACTTGTCTGATCCTATTCGCCGACCAGTGCTATCAGCAGAACCATCTATATGTTCAATAGTTTTACAACCTAACGATAAATTCGTTATATTTGCATCTGACGGCCTTTGGGAACACATGACAAATCTGGAAGCTGTTGAGATTGTTCATAGCAACCCTAGAACTGGAATTGCAAGAAGACTTCTTCAGACGGCTTTGAATGAGGCAGCAAGGAAAAGGGAAATGAGATATAAAGATCTGCTGAAGGTCGAAAAGGGGATTAGGCGATTTTTCCACGATGATATCACTGTCGTTGTTATCTTCATCGACCACGAGTTGCAAAATCAGAATGTTAATGTTCCTGAGATATCCATAAAAGGTTTTATCGACACAGTTGGACCATCAAATTTTAGAAGTTTCCAAGAAATGCAATGA 1164 0.3935 MFSWLTRLVSSCLRPVRRYARMNKDIENDFDVSSTSEDALVWCKDLEKHSCGEFSFAIVQANEVIEDHSQVETGSDSVFVGVYDGHGGPDASRFVNDHLFNHLIRIAKENDSISEDIIRNAVTATEDGFMNLVRRSFGIKPLIAAMGSCCLVGVIWKGTLYIANLGDSRAVIGSIGRSNKIVAKQLTKEHNACKADIRRELRSLHPEDSQIVVMKHGTWRIKGIIQVSRSIGDAYLKRPEFSFDPSFPKFHLSDPIRRPVLSAEPSICSIVLQPNDKFVIFASDGLWEHMTNLEAVEIVHSNPRTGIARRLLQTALNEAARKREMRYKDLLKVEKGIRRFFHDDITVVVIFIDHELQNQNVNVPEISIKGFIDTVGPSNFRSFQEMQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02129 387 Pfam Protein phosphatase 2C 66 321 IPR001932 -
Trre2g02129 387 CDD PP2Cc 60 352 IPR001932 -
Trre2g02129 387 SUPERFAMILY PP2C-like 60 353 IPR036457 -
Trre2g02129 387 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Trre2g02129 387 Gene3D - 20 363 IPR036457 -
Trre2g02129 387 FunFam Probable protein phosphatase 2C 42 44 360 - -
Trre2g02129 387 PANTHER PROTEIN PHOSPHATASE 39 350 IPR015655 GO:0004722|GO:0006470
Trre2g02129 387 ProSiteProfiles PPM-type phosphatase domain profile. 53 352 IPR001932 -
Trre2g02129 387 SMART PP2C_4 33 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02129 Trre-Chr2 17381264 17384272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02129 1 383 PP2C-type Phosphatase Gene Family AT5G06750 67.519 0.0 542
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02129 K01102 - gmx:100778238 655.21