Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02114 ATGGCTCTCAAGTCAGACGATGAACTTTTACGACCATTGCTCTACAACAAAATTCATAATATACCTTTGCCCAATTATATCAACATTTTTGAACATGATTTGTTCGGTACTGTAAAAAACCCTTGGGAAATTTGGGAAGAGTTTAAGGATTCTCGTTCATATTGTGGAAAAGACTTGTATGTTTTCAGTATCTTAAGGAAGAAATCTGCCACTAGCAAACGCGTAGTTTGCACTATTGGAATTGGTACATGGGAAGGTGAAGACACCGGAAAAAGTATATTCGCCAAAGATACAAATCAACTCCTTGGTATCAAAAAACGTTATCGGTTCAAAAAAAGTGACTCTTATCAAGACGGTGGGTGGATCTTGTACGAGTATAGCCTTGACAAATCTTTAATAAGCAATCCTTCGGCCAAGAATTATGTTCTATGCAGACTTAGGAAGAACTTCAAGCATCTACAAAATACAGGGACAAGACTTTATCACCAACCCAATTCACACATAACAAATTGCAGAGTTGTACCAAGAAAAAATCCAAGAATGAACAATGTTGGACAAGATAGATCACAAAGAAAGACCGTTGCTGTTTCTCCACGTGCGGCGGCAACCACCATATCCGAGAATAATAGCGTTTGGTTGGGGGAAAATATTGAACCAAAACCAAGGAATCAACTTGACAGTGGAAATAACAAGACCGAGGCTGTTAAAATTACTAATGAAACAGAGGGCGGATTTAACAAAGAAGAACATGTTGAATGCACTATGAACAAACAAGATGAAAATGATATCATTATAAACAATGATGATGATCTTATTATGAGCAAAGAAGAGGGTTGTGTCACTATGTCCTGGCCTGAGCTTTTTGCACAGGAGCTCGAAGAAGATGATGTTCCATTGCTTTCCAATGTTCCAATGCTTTCCTATATATGGTAG 933 0.3783 MALKSDDELLRPLLYNKIHNIPLPNYINIFEHDLFGTVKNPWEIWEEFKDSRSYCGKDLYVFSILRKKSATSKRVVCTIGIGTWEGEDTGKSIFAKDTNQLLGIKKRYRFKKSDSYQDGGWILYEYSLDKSLISNPSAKNYVLCRLRKNFKHLQNTGTRLYHQPNSHITNCRVVPRKNPRMNNVGQDRSQRKTVAVSPRAAATTISENNSVWLGENIEPKPRNQLDSGNNKTEAVKITNETEGGFNKEEHVECTMNKQDENDIIINNDDDLIMSKEEGCVTMSWPELFAQELEEDDVPLLSNVPMLSYIW 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02114 310 PANTHER NAC TRANSCRIPTION FACTOR 56 5 201 - -
Trre2g02114 310 SUPERFAMILY NAC domain 5 148 IPR036093 GO:0003677|GO:0006355
Trre2g02114 310 Gene3D NAC domain 5 153 IPR036093 GO:0003677|GO:0006355
Trre2g02114 310 Pfam No apical meristem (NAM) protein 5 128 IPR003441 GO:0003677|GO:0006355
Trre2g02114 310 ProSiteProfiles NAC domain profile. 1 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02114 Trre-Chr2 17218053 17220737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02114 5 148 NAC Transcription Factor Family AT2G24430 29.252 5.89e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Trre2g02114 NAM 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02114 - - tpra:123896066 456.832