Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02111 ATGTCTCATCATCAGATGGAATCATGTACAAATCAAGACAAGAAATCTTCATCACCTTATGGCTTTGATTTTGCATCATCTAGCAACTCTGATTTTAAGATAACTTCAAAGGGTAAAAGAAGATTAAGATGGACAAAAGAATTGCACGAGCCATTTATTACGATTGTCAACCAGCTTGGTGGTCCAGAAAAGGCAAAGCCTAAGGCTATACTACAGATGATGGGTTTGGATCATATGCTCACCATTACTCATGTTAAAAGTCATTTGCAGAAATATCGTTCTACTTTACGGTTACACACGCACAAAGCTTTGAAAGGAACATCTGAGGAAGAGCAGAGAACAAATGGGATTAATGAGCTTCAAGTCAAAATCCAAATGCAAATAGAGGAATCGCGACAACTACAACTTGAGGTTGAAAGGAGCAATCAACGACAATTGGAGTTGCAGAAAAATTTGCAAATGGTAATTGAACAGCAGAGGAAGCAACTCAAATCAATGTTATATCAACAAAAGCAAAGAACCAAATTGGAGAATAATCTTGATTCACCAAAGAATTGA 558 0.3674 MSHHQMESCTNQDKKSSSPYGFDFASSSNSDFKITSKGKRRLRWTKELHEPFITIVNQLGGPEKAKPKAILQMMGLDHMLTITHVKSHLQKYRSTLRLHTHKALKGTSEEEQRTNGINELQVKIQMQIEESRQLQLEVERSNQRQLELQKNLQMVIEQQRKQLKSMLYQQKQRTKLENNLDSPKN 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02111 185 SUPERFAMILY Homeodomain-like 37 96 IPR009057 -
Trre2g02111 185 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 97 IPR017930 -
Trre2g02111 185 MobiDBLite consensus disorder prediction 1 22 - -
Trre2g02111 185 Pfam Myb-like DNA-binding domain 42 93 IPR001005 -
Trre2g02111 185 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 175 IPR044848 GO:0003700
Trre2g02111 185 Coils Coil 117 151 - -
Trre2g02111 185 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Trre2g02111 185 Gene3D - 38 96 - -
Trre2g02111 185 FunFam Two-component response regulator 35 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02111 Trre-Chr2 17175963 17177764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02111 26 170 G2-like Transcription Factor Family AT4G28610 45.205 3.29e-29 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre2g02111 Myb_DNA-binding 1.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02111 - - psat:127115590 256.529