Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02105 ATGGCTGAATCAACAGCGGACAACGAACAAGATGACGATTACATGGCTGATCTTTCTCGCTTTCTTCCTTCCGATTCTATTATTCAACCTCCAAATCCAAAATCTTCTTCAAAAAGGATTTCTGAAAAGAAAGATCCTTCAATCAACTCTTCCAAGAGCCATTTGAAAGCGCTTAACTGGCAAGAACGGCGAAAAATTGAAAGAGAAAGAAAGCAAATACAAGAGGATGAGCAAACATTAGCAAAAGTTGAAGCTCCAATACCACAATCCAACATTGGGTTTAAGCTTCTCAAACAAATGGGTTATACACCAGGTTCTGCTCTTGGTAAGGAGGGTTCGGGCAGGGCTGAACCGGTGGGGATTGAAATTCGACGGTCACGAGCAGGTATAGGTTTAGATGATCCCCACAAGGAGAAGATGAAGAGGGAGGAAATCACGATCAAACAGAAAAGGAAGAATGAGCAGGCTCTGATGGAAGAATTTGGGTCTAGGCAGAAATCACGGTGGCAAAGTAAGAGAATTATTGTTAATTTCAACAAGGCTAAGGCTGCCCTTGACCAATTGGAGAATCGGGATATTGTGGTGCCCCCGAAGAACGAGGATGACGCAGAGGGTGAAGATGAAGAAGAGGAAGAAATAACAGAAGAGGGCTTGCTCGATGTTTTGATGAAACTAAGGGATGAGTTCAATTACTGCCTCTTCTGCGGATGCAAATATGAATCGAGTTCTGCCCTTTTGGATAACTGCCCTGGAATCAATGAAGATGACCACTAA 774 0.4315 MAESTADNEQDDDYMADLSRFLPSDSIIQPPNPKSSSKRISEKKDPSINSSKSHLKALNWQERRKIERERKQIQEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKEGSGRAEPVGIEIRRSRAGIGLDDPHKEKMKREEITIKQKRKNEQALMEEFGSRQKSRWQSKRIIVNFNKAKAALDQLENRDIVVPPKNEDDAEGEDEEEEEITEEGLLDVLMKLRDEFNYCLFCGCKYESSSALLDNCPGINEDDH 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02105 257 MobiDBLite consensus disorder prediction 1 63 - -
Trre2g02105 257 Pfam G-patch domain 89 132 IPR000467 GO:0003676
Trre2g02105 257 MobiDBLite consensus disorder prediction 117 140 - -
Trre2g02105 257 Pfam Domain of unknown function (DUF4187) 206 257 IPR025239 -
Trre2g02105 257 MobiDBLite consensus disorder prediction 105 140 - -
Trre2g02105 257 SMART G-patch_5 87 133 IPR000467 GO:0003676
Trre2g02105 257 MobiDBLite consensus disorder prediction 192 214 - -
Trre2g02105 257 Coils Coil 140 160 - -
Trre2g02105 257 Coils Coil 171 191 - -
Trre2g02105 257 PANTHER UNCHARACTERIZED 8 257 IPR039249 -
Trre2g02105 257 ProSiteProfiles G-patch domain profile. 89 135 IPR000467 GO:0003676
Trre2g02105 257 SMART DUF4187_2 203 257 IPR025239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02105 Trre-Chr2 17141847 17143699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02105 81 131 C2H2 Transcription Factor Family AT5G26610 43.137 1.69e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02105 - - tpra:123896801 456.832