Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02104 ATGATCATCAACACTTCTACTTTGTCTTCTTCACCACATTTTCATCATCAACAATGCTCTGTTCTTGTAAATGACAACAACAAAAACCCTAAAAATAACGTTGATCAACCAAACAACAATTTTCTTTCTTTGAAACACAACCTTGTTCTTCAACAACCTCAAACAAACAACAATCAGACACAAGGCCGCATCTTGAAAATCACATTCTTTTTGTCTTCTGCTCGTAATCATAACAACAATAATAATGCTCCTGTTGTTGTTGATGATGATGATGATGATGATCTTGATGGAAAACAACAACAGAAGATGAAATCTTTTTCATGTAATGTTTGCAACAAATCTTTTTCATCAAACAAAGCTTTGAACGGCCACATGAGATGGCATACTCAAAAGGGTTTCAAGAAAAGTACTACTACTGCATCATGGTCGTTGTTGGAATTGGAACAGAACAAGAAGATGAATCATCATCAAGATCAAGATCAGTTACCACCGGCTATTGATTTGTCAAATTATTTGCCTCCAAGAACATACAAGACCAATAAACGGGGCAACAGGTTTTTTAATGATGATGATGATGCTCGTAACGCTGCTCAAGCATTGTTGGATATGTCTCGCGGAAAGTTTCTGAATTTCGATGATGATGTGAATAGCCGTGACTGTAAAAGGATCAAGCTTTCCAATCAAGAAGAAAGGTAG 696 0.3621 MIINTSTLSSSPHFHHQQCSVLVNDNNKNPKNNVDQPNNNFLSLKHNLVLQQPQTNNNQTQGRILKITFFLSSARNHNNNNNAPVVVDDDDDDDLDGKQQQKMKSFSCNVCNKSFSSNKALNGHMRWHTQKGFKKSTTTASWSLLELEQNKKMNHHQDQDQLPPAIDLSNYLPPRTYKTNKRGNRFFNDDDDARNAAQALLDMSRGKFLNFDDDVNSRDCKRIKLSNQEER 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02104 231 ProSitePatterns Zinc finger C2H2 type domain signature. 108 128 IPR013087 -
Trre2g02104 231 Gene3D Classic Zinc Finger 94 163 - -
Trre2g02104 231 Pfam C2H2-type zinc finger 106 128 - -
Trre2g02104 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 106 133 IPR013087 -
Trre2g02104 231 MobiDBLite consensus disorder prediction 78 98 - -
Trre2g02104 231 SUPERFAMILY beta-beta-alpha zinc fingers 104 131 IPR036236 -
Trre2g02104 231 MobiDBLite consensus disorder prediction 153 190 - -
Trre2g02104 231 FunFam Zinc finger protein 407 103 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02104 Trre-Chr2 17139020 17139715 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre2g02104 zf-C2H2_6 1.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02104 - - tpra:123922668 56.6102