LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g02099	ATGGTTCGTAATTGTAACTGCTTGAATCTCATCTTCGCTGTGTTCTTCACAATTTTCATTTCTCAGGGTTTCGCATTCACTGATCCACTTGACGTCGCAGCTCTCAAGGATATGTACGGTAGCCTAAATAACCCGCAAGTGCTGCAAGGATGGAACGGCGGTGATCCTTGTGAGGAGGCTTGGACAGGAGTAGCTTGTTCGGGGTCCTCGGTTATACATCTGAAAATTCAAGGAATGAACCTCACCGGATCTCTTGGAGCCGCGCTGTATAATCTACAAAGTTTGAAGATATTTGATGTCAGTTCCAACAGCATAATGGGTGAAATACCATATGGATTGCCTCCCAATGCCACACATATAAACATGGCTTGCAACTATTTGAGCCAAAATATACCAAGTTCATTATCAAACATGAAAAGACTTAGACATCTGAATTTAAGCCACAATTTCTTATATGGACCAATTGGCAATGTGTTCACAGGCTTAGATAATCTCAAAGAAATGGACCTTTCTTATAATAATTTCACAGGAGATCTACCAAGTTCATTTGGTTCCTTGATAAACATTGAGAAATTGTTCCTGCAGAATAACAGATTTACTGGATCAGTCACATACCTGGCTGAGCTTCCACTCATTTATTTGAACATTCAAGAAAATCTGTTTAGTGGCATTCTTCCACAACATTTTCAGTCCATTCCAAACTTATGGATTGGTAGCAATATGTTCCATGCAGTGGACGGCTCTCCTCCTTGGGGATTTCCATTGGACGGTGTACCAGTTGAACAAAATACCAGCCGCCCACCCACAACCCAGGCAAATGCCATCGAGAATTATGCTCCTCCTAAAGCAATAAAACAAAAGAAGAAACAAATTGGTCTTGGAGGAATAGCTTTTATGGTTGGTGGGGGAACATTGATGGTAACAGGATTAGCGCTCTTCATTGCGATCAGTTTGAAAAAATTTCACACTCAGAGACCAAAAAGCTTTGTCTTCGAAAGCAGCCACCGTACTTCATTTTCTGCTCATCCATTTCCTTCTAACCCAATCAGTGCAGTCAAAGAAATTTCTCCTACGGCACAAGATGATAGCCTGCAAATCCCACCTTTCAATGCTGCATCTCTTTTGGATCCAAGGCGATTGCCGTCCCAGAAACATAAAAGGATGGGAGAAACGTCAAGAAGAAGTTTTTCTGAAAGAGACAAATTCACCGGAAGGACGAAGGTTTACACGGTAGCTGAGGTTCAGTTGGTTACTAACAACTTCAGTGAAGACAACCTTCTCGGAGTAGGCTCTCTTGGGCCTGTTTACAGAGCAGAGTTACCAGATAACAAAGTTTTGGCTGTGAAGAACATCCAAATGGCAGGGTTATCTTTCAGTGAAGAGGAAAAGTTCTTAGACGTGGTCTGTACTGCTTCCCGTCTGAAGCACCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCACGGACAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGACGATGCTCTACACAGTGCATCATACAAACCTTTATCTTGGGGACTCCGTCTACGAATCGCTATAGGTGTTGCACAAGCTCTAGACTATCTGCACTCCACGTTCTCCCCTCCTGTCACCCATGGCAACTTGAAGGCTGCCAATATTCTACTGGATGAAAATCTGATGCCTCGTGTTTCTGACTGTGGCTTGGCTATCTTAAAACCACTGACCAACACGAAAGCCAAAGCTCGGGCTTCTGAGATTGCTATTAGAGACAGTGGGTATGATTCACCTAATCATAGCCAACCTGGAACCAGCAGCACAAAGAGTGACATATTTGCCTTTGGGGTGTTGCTTTTGGAGCTGTTATCAGGAAGAAAACCTTTCGAAAGTTTTATGCCAAAGGAAGAGCAATATCTAGCAAATTGGGCTTCATCGAGGCTTCATGATAGCGAGAGTTTGGAGCAGATGGTAGATCCAGCAATTAAAAGAACATTCTCATCTAAAGCTCTTTCTCGTTATGCTGATATCATTTCTCTATGCACTCAGCCTGCAAAGGAATTCAGACCTCCAATGTCTGAAATAGTGGACTCTCTTGTATCTTTTATGCAAAAGCTCAACGTGTCGAAGAGTGTTGGTGGGTTAGCAGATGGAACTGAACTTGACCCACTTGACAGATCTTTTCGTACAACCACCTCCCGCTTTATACCTTCACCATCATTGAGCTATGTATCTGCTTGA	2235	0.4273	MVRNCNCLNLIFAVFFTIFISQGFAFTDPLDVAALKDMYGSLNNPQVLQGWNGGDPCEEAWTGVACSGSSVIHLKIQGMNLTGSLGAALYNLQSLKIFDVSSNSIMGEIPYGLPPNATHINMACNYLSQNIPSSLSNMKRLRHLNLSHNFLYGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLINIEKLFLQNNRFTGSVTYLAELPLIYLNIQENLFSGILPQHFQSIPNLWIGSNMFHAVDGSPPWGFPLDGVPVEQNTSRPPTTQANAIENYAPPKAIKQKKKQIGLGGIAFMVGGGTLMVTGLALFIAISLKKFHTQRPKSFVFESSHRTSFSAHPFPSNPISAVKEISPTAQDDSLQIPPFNAASLLDPRRLPSQKHKRMGETSRRSFSERDKFTGRTKVYTVAEVQLVTNNFSEDNLLGVGSLGPVYRAELPDNKVLAVKNIQMAGLSFSEEEKFLDVVCTASRLKHPNIVALKGYCLEHGQHLLVYDYVRNLTLDDALHSASYKPLSWGLRLRIAIGVAQALDYLHSTFSPPVTHGNLKAANILLDENLMPRVSDCGLAILKPLTNTKAKARASEIAIRDSGYDSPNHSQPGTSSTKSDIFAFGVLLLELLSGRKPFESFMPKEEQYLANWASSRLHDSESLEQMVDPAIKRTFSSKALSRYADIISLCTQPAKEFRPPMSEIVDSLVSFMQKLNVSKSVGGLADGTELDPLDRSFRTTTSRFIPSPSLSYVSA	744

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Trre2g02099	744	SUPERFAMILY	Protein kinase-like (PK-like)	397	697	IPR011009	-
Trre2g02099	744	SUPERFAMILY	L domain-like	34	236	-	-
Trre2g02099	744	Pfam	Protein tyrosine and serine/threonine kinase	425	697	IPR001245	GO:0004672\|GO:0006468
Trre2g02099	744	FunFam	Leucine-rich repeat receptor-like protein kinase	499	708	-	-
Trre2g02099	744	Gene3D	Phosphorylase Kinase; domain 1	382	498	-	-
Trre2g02099	744	Pfam	Leucine rich repeat	158	199	IPR001611	GO:0005515
Trre2g02099	744	ProSiteProfiles	Protein kinase domain profile.	421	701	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Trre2g02099	744	Pfam	Leucine rich repeat N-terminal domain	31	67	IPR013210	-
Trre2g02099	744	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	17	699	IPR046959	-
Trre2g02099	744	Pfam	Leucine Rich Repeat	140	153	IPR001611	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g02099	Trre-Chr2	17112767	17117984	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g02099	27	744	Strubbelig Receptor Gene Family	AT5G06820	54.785	0.0	736

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Trre2g02099		PK_Tyr_Ser-Thr	3.8e-33	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g02099	-		-	tpra:123896060	1392.87

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