Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02098 ATGGTTCGTAATTGTAACTGCTTGAATCTCATCTTCGCTGTGTTCTTCACAATTTTCATTTCTCAGGGTTTCGCATTCACTGATCCACTTGACGTCGCAGCTCTCAAGGATATGTACGGTAGCCTAAATAACCCGCAAGTGCTGCAAGGATGGAACGGCGGTGATCCTTGTGAGGAGGCTTGGACAGGAGTAGCTTGTTCGGGGTCCTCGGTTATACATCTGAAAATTCAAGGAATGAACCTCACCGGATCTCTTGGAGCCGCGCTGTATAATCTACAAAGTTTGAAGATATTTGATGTCAGTTCCAACAGCATAATGGGTGAAATACCATATGGATTGCCTCCCAATGCCACACATATGAATTTAAGCCACAATTTCTTATATGGACCAATTGGCAATGTGTTCACAGGCTTAGATAATCTCAAAGAAATGGACCTTTCTTATAATAATTTCACAGGAGATCTACCAAGTTCATTTGGTTCCTTGATAAACATTGAGAAATTGTTCCTGCAGAATAACAGATTTACTGGATCAGTCACATACCTGGCTGAGCTTCCACTCATTTATTTGAACATTCAAGAAAATCTGTTTAGTGGCATTCTTCCACAACATTTTCAGTCCATTCCAAACTTATGGATTGGTAGCAATATGTTCCATGCAGTGGACGGCTCTCCTCCTTGGGGATTTCCATTGGACGGTGTACCAGTTGAACAAAATACCAGCCGCCCACCCACAACCCAGGCAAATGCCATCGAGAATTATGCTCCTCCTAAAGCAATAAAACAAAAGAAGAAACAAATTGGTCTTGGAGGAATAGCTTTTATGGTTGGTGGGGGAACATTGATGGTAACAGGATTAGCGCTCTTCATTGCGATCAGTTTGAAAAAATTTCACACTCAGAGACCAAAAAGCTTTGTCTTCGAAAGCAGCCACCGTACTTCATTTTCTGCTCATCCATTTCCTTCTAACCCAATCAGTGCAGTCAAAGAAATTTCTCCTACGGCACAAGATGATAGCCTGCAAATCCCACCTTTCAATGCTGCATCTCTTTTGGATCCAAGGCGATTGCCGTCCCAGAAACATAAAAGGATGGGAGAAACGTCAAGAAGAAGTTTTTCTGAAAGAGACAAATTCACCGGAAGGACGAAGGTTTACACGGTAGCTGAGGTTCAGTTGGTTACTAACAACTTCAGTGAAGACAACCTTCTCGGAGTAGGCTCTCTTGGGCCTGTTTACAGAGCAGAGTTACCAGATAACAAAGTTTTGGCTGTGAAGAACATCCAAATGGCAGGGTTATCTTTCAGTGAAGAGGAAAAGTTCTTAGACGTGGTCTGTACTGCTTCCCGTCTGAAGCACCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCACGGACAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGACGATGCTCTACACAGTGCATCATACAAACCTTTATCTTGGGGACTCCGTCTACGAATCGCTATAGGTGTTGCACAAGCTCTAGACTATCTGCACTCCACGTTCTCCCCTCCTGTCACCCATGGCAACTTGAAGGCTGCCAATATTCTACTGGATGAAAATCTGATGCCTCGTGTTTCTGACTGTGGCTTGGCTATCTTAAAACCACTGACCAACACGAAAGCCAAAGCTCGGGCTTCTGAGATTGCTATTAGAGACAGTGGGTATGATTCACCTAATCATAGCCAACCTGGAACCAGCAGCACAAAGAGTGACATATTTGCCTTTGGGGTGTTGCTTTTGGAGCTGTTATCAGGAAGAAAACCTTTCGAAAGTTTTATGCCAAAGGAAGAGCAATATCTAGCAAATTGGGCTTCATCGAGGCTTCATGATAGCGAGAGTTTGGAGCAGATGGTAGATCCAGCAATTAAAAGAACATTCTCATCTAAAGCTCTTTCTCGTTATGCTGATATCATTTCTCTATGCACTCAGCCTGCAAAGGAATTCAGACCTCCAATGTCTGAAATAGTGGACTCTCTTGTATCTTTTATGCAAAAGCTCAACGTGTCGAAGAGTGTTGGTGGGTTAGCAGATGGAACTGAACTTGACCCACTTGACAGATCTTTTCGTACAACCACCTCCCGCTTTATACCTTCACCATCATTGAGCTATGTATCTGCTTGA 2163 0.4309 MVRNCNCLNLIFAVFFTIFISQGFAFTDPLDVAALKDMYGSLNNPQVLQGWNGGDPCEEAWTGVACSGSSVIHLKIQGMNLTGSLGAALYNLQSLKIFDVSSNSIMGEIPYGLPPNATHMNLSHNFLYGPIGNVFTGLDNLKEMDLSYNNFTGDLPSSFGSLINIEKLFLQNNRFTGSVTYLAELPLIYLNIQENLFSGILPQHFQSIPNLWIGSNMFHAVDGSPPWGFPLDGVPVEQNTSRPPTTQANAIENYAPPKAIKQKKKQIGLGGIAFMVGGGTLMVTGLALFIAISLKKFHTQRPKSFVFESSHRTSFSAHPFPSNPISAVKEISPTAQDDSLQIPPFNAASLLDPRRLPSQKHKRMGETSRRSFSERDKFTGRTKVYTVAEVQLVTNNFSEDNLLGVGSLGPVYRAELPDNKVLAVKNIQMAGLSFSEEEKFLDVVCTASRLKHPNIVALKGYCLEHGQHLLVYDYVRNLTLDDALHSASYKPLSWGLRLRIAIGVAQALDYLHSTFSPPVTHGNLKAANILLDENLMPRVSDCGLAILKPLTNTKAKARASEIAIRDSGYDSPNHSQPGTSSTKSDIFAFGVLLLELLSGRKPFESFMPKEEQYLANWASSRLHDSESLEQMVDPAIKRTFSSKALSRYADIISLCTQPAKEFRPPMSEIVDSLVSFMQKLNVSKSVGGLADGTELDPLDRSFRTTTSRFIPSPSLSYVSA 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02098 720 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Trre2g02098 720 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 362 474 - -
Trre2g02098 720 FunFam Leucine-rich repeat receptor-like protein kinase 475 684 - -
Trre2g02098 720 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 117 229 - -
Trre2g02098 720 SUPERFAMILY L domain-like 34 212 - -
Trre2g02098 720 Gene3D Transferase(Phosphotransferase) domain 1 476 688 - -
Trre2g02098 720 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 17 675 IPR046959 -
Trre2g02098 720 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Trre2g02098 720 Gene3D Ribonuclease Inhibitor 29 229 IPR032675 -
Trre2g02098 720 Gene3D Phosphorylase Kinase; domain 1 358 474 - -
Trre2g02098 720 SUPERFAMILY Protein kinase-like (PK-like) 373 673 IPR011009 -
Trre2g02098 720 ProSiteProfiles Protein kinase domain profile. 397 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02098 720 Pfam Protein tyrosine and serine/threonine kinase 401 673 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02098 Trre-Chr2 17112767 17117984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02098 27 720 Strubbelig Receptor Gene Family AT5G06820 52.843 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Trre2g02098 PK_Tyr_Ser-Thr 3.6e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02098 - - tpra:123896060 1331.62