Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02091 ATGGGATTTTCTTTAGCTATTGAAGATGCAGAACAAAAAGAACAAGACCAAAGATTTTTAGGTTCCAATAACAATTCTATGATCATGCCTTCTTCAAGTATTATCAAAAGCACAACAAATTCAACAATAACTCAACTTGAATCATTTCAACAACAACAAATCCATCACCATCTTCATCAGCAACAACAACAACATCAAAATCAACATAATCATCATATGCATGACCATCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATCCCTGGCAACTACTTAAGCAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTTGATGGACAATCACAAGCTGATCCTTCTAGTATTCAAGATCAAAGACAGAATTCATCATCATCTTCAGGAATGAGACCACCACCAACTCTTAACATTTTTCCATCTCAACCAATGCATGTAGCACCACCACCACCATCATCCAATTCAAAGGGTAGCATGGGATTAACCTCTCCACAATCTAGTGGTGCAAAGAAAGCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAACCCTCTCTGCACCTGCACCACCAAAACTAGTCAAGAGGGAGAATAATCGCAAGGGTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAACTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTGCAGCGTGCTAGAACTCAAGTAAGGAAAAAAATTAAACATATTTTTTTTAGTGCATAG 870 0.3782 MGFSLAIEDAEQKEQDQRFLGSNNNSMIMPSSSIIKSTTNSTITQLESFQQQQIHHHLHQQQQQHQNQHNHHMHDHHQISFGMMPSSSSSSIPGNYLSKDSSAYDLGELDQAFFLYLDGQSQADPSSIQDQRQNSSSSSGMRPPPTLNIFPSQPMHVAPPPPSSNSKGSMGLTSPQSSGAKKASQPSMELANQRNETLSAPAPPKLVKRENNRKGTTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARTQVRKKIKHIFFSA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02091 289 MobiDBLite consensus disorder prediction 52 75 - -
Trre2g02091 289 MobiDBLite consensus disorder prediction 207 234 - -
Trre2g02091 289 PANTHER TRANSCRIPTION FACTOR TGA9 147 277 - -
Trre2g02091 289 FunFam BZIP family transcription factor 230 279 - -
Trre2g02091 289 MobiDBLite consensus disorder prediction 122 234 - -
Trre2g02091 289 MobiDBLite consensus disorder prediction 52 67 - -
Trre2g02091 289 Coils Coil 250 284 - -
Trre2g02091 289 Gene3D - 230 285 - -
Trre2g02091 289 SMART brlzneu 227 289 IPR004827 GO:0003700|GO:0006355
Trre2g02091 289 Pfam bZIP transcription factor 231 283 IPR004827 GO:0003700|GO:0006355
Trre2g02091 289 MobiDBLite consensus disorder prediction 122 146 - -
Trre2g02091 289 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 234 249 IPR004827 GO:0003700|GO:0006355
Trre2g02091 289 SUPERFAMILY Leucine zipper domain 231 283 IPR046347 GO:0003700|GO:0006355
Trre2g02091 289 MobiDBLite consensus disorder prediction 162 199 - -
Trre2g02091 289 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 229 285 IPR004827 GO:0003700|GO:0006355
Trre2g02091 289 MobiDBLite consensus disorder prediction 147 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02091 Trre-Chr2 17032276 17034503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02091 94 289 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 53.465 1.20e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre2g02091 bZIP_1 1.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02091 K14431 - gmx:100799713 313.923