Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02090 ATGGGTGGAGGTGCACTTATGGGAGGAGACCAAGGAATTCCAATTTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGGGAGGTGGTTAGAGGAGCACCACAGGCTAGTGTGTGAGCTAAGAGCAGCAGTTGATGAACATTTACATGAAAATGAGCTTAGATTATATGTGGAAAATTGCTTAGCTCACTATGATCAAGTAATTAACCTAAAAGCACTTCTAGCTAGAACAGATGTGTTCCATCTTGTTTATGGAATGTGGAAGACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCACTTACTGAGCAACAAATACTTGGAATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAAGCACTTTCACAAGGACTTGATGCACTGAACCAATCTCTTTCAGAGACTATAACATCAGACTCTTTGAGCTCTCCTCCTAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCAACAAACAATTCATCGTCTGCATCAGCTGTTAACAACTCGTCAAGCTGCAAGGTGTTTGGTTGCAATGTCGGAGTATTTCCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGCCCTCGCCAAGAATAG 729 0.4266 MGGGALMGGDQGIPISMNSISSEAAMFDVEYGRWLEEHHRLVCELRAAVDEHLHENELRLYVENCLAHYDQVINLKALLARTDVFHLVYGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSSPPNMANYMGQMALAMNKLSTLESFVRQADNLRQQTIHRLHQLLTTRQAARCLVAMSEYFHRLRALSSLWLTRPRQE 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02090 242 Pfam Seed dormancy control 42 117 IPR025422 GO:0006351|GO:0043565
Trre2g02090 242 ProSiteProfiles DOG1 domain profile. 24 238 IPR025422 GO:0006351|GO:0043565
Trre2g02090 242 PANTHER TRANSCRIPTION FACTOR TGA9 15 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02090 Trre-Chr2 17015659 17021675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02090 3 242 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 71.371 1.31e-127 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02090 K14431 - gmx:100815176 431.409