Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02088 ATGGCTCAAATGCAATACTATATCCAACTTTTCTTCCTCTGCATGCTCTCAACCATTGCAATTCTAGCCATACTAACTAGAAAGAAGAACAAGAAGCATCTTACTCCACCAAGCCCTCCATCACTACCTATCATTGGACACCTTCACCTTATTTCTGAATTACCTCACCAAAGTTTTCACAAACTCTCAACACAATATGGTCCTATAATGCAACTTTACTTAGGCTCTAAGCTATCTGTAGTACTTTCATGTCCAGAAATCATAAAGGAGTTTCTTAAAACCAAAGAAACTTACTTCTCCAACCGATTTCGAGGAGCTGCAGTCCACTACTTATCATATGGATCAAAGGGTTTTTTGTTTGCACCTTATGGTAACTATTGGAAGTTCATGAAGAAGAAATGCATGTCAGAGCTTCTTGGTGGAAAAACAATTGATCAATTCTGTCCCTTAAGGCAACAAGAAACTTTAAGGTTTCTAAGAGTTTTGCAGAAGAAAGGGGAAGCAGGCGAGGCCATCGATGTTGGTGGAGAACTCTTGACTCTGACAAATAGAATCATAACAAGAATGACAATGAGTAAAACTTTTTATGAAAATGATAGTGATGAGGAAGATATTAGGAAGATGGTGCAAGATAGTGTAGAGTTAGCAGGGAAATTTAATGTGTCAGATTTTATTTGGTTTTTTAAGAATTGGGATTTGCAAGGAATGAACAAAAGGCTTGAAGGGATTATGGACAGGTTTGACACAATGATGGAGAGAGTGATAAAGGAGCATCAAGAGGAAAGGAAGAAAAGAAAGGAAAATAAGAGAATGTCAAGGCTTTCATCTTGGACGTGTTTTTAG 843 0.3749 MAQMQYYIQLFFLCMLSTIAILAILTRKKNKKHLTPPSPPSLPIIGHLHLISELPHQSFHKLSTQYGPIMQLYLGSKLSVVLSCPEIIKEFLKTKETYFSNRFRGAAVHYLSYGSKGFLFAPYGNYWKFMKKKCMSELLGGKTIDQFCPLRQQETLRFLRVLQKKGEAGEAIDVGGELLTLTNRIITRMTMSKTFYENDSDEEDIRKMVQDSVELAGKFNVSDFIWFFKNWDLQGMNKRLEGIMDRFDTMMERVIKEHQEERKKRKENKRMSRLSSWTCF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02088 280 MobiDBLite consensus disorder prediction 259 280 - -
Trre2g02088 280 SUPERFAMILY Cytochrome P450 36 272 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02088 280 Gene3D Cytochrome P450 27 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02088 280 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02088 280 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02088 280 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02088 280 PANTHER CYTOCHROME P450 93A3-LIKE 13 269 - -
Trre2g02088 280 Pfam Cytochrome P450 36 270 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02088 Trre-Chr2 16984920 16986463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02088 1 271 Cytochrome P450 AT5G06900 42.491 4.01e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02088 K24188 - gmx:100805931 344.739