Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02081 ATGCCACCACCTCATAACAACAATGTTCTTCACATTTCCAACATGTTCTTTACTACTTTTCTCTTTCTATGTCTCTTCATTCCTTTAACTTCATCTCTTAACTCAGATGGTCTCTCCTTGCTAGCACTCAAATTAGCAATAGACATGGACCCCACCGGTATTCTCAACTCGTGGTCTGACTCAGTTTCCACACCTTGTAACTTTGAAGGAGTAACATGCAACAAACATGACCGAGTTACTCAACTCACTCTCCCTTCAAAATCCCTAACAGGTTATATACCTTCCGAGTTAGGCCATCTTACTCAACTCACTACCCTTAATCTCTCAAACAACAATTTCACCAAAACAATTCCTAACTCACTCTTCAACACTACCAACAATCTCATCATCTTAGACCTTTCTCATAATTCTCTCTCTGGTCCTCTTCCACCATCGTTCACTTCACTCAAATCGTTAATCCATTGTGATTTATCTTCTAATTTTCTTAATGGTTCGTTACCTGAGTCGTTAACTGAATTAACTGCTTTAACTGGTACTTTGAATCTTTCTTTTAATGGTTTTTCCGGTGAGATACCGGCTTCTTTAGGTAATCTTCCGGTTGAAGTTAGTTTGGATCTTCGTGATAATAATCTTACTGGTGAAATTCCTCAAGTGGGGTCCTTGCTTAATCAAGGACCTACCGCTTTTTCCGGGAATCCCGGACTTTGTGGGTTTCCGTTGCGGAACCTTTGTCCATATGCTCGGACAAAGGTTCCTGATATTTACCCCGAAAACCCTGATCCGAACCCGAATGCGGTTCAGACTGGGGCGATTCGAGATAATGAGAGGGAGAGGGGTGGGTTGTTTATTGTTGTTGGTTTGGTTTTGATTTGTGTTGGGACTGTGGTGGTTTTGATGTCGGTGGTGGTAGTCCGGCGGCGACGGAGGAGGTTGAATGATGGGGAAAGGGGATTTGAGAAGGGGAAGGTGGAAGGTGGTGAGGTTTTGGGTTGTGGGGAGGAGCAGAAGGGTAGATTTGTGGTGGTGGATGAAGGGTTTGGGTTTGAATTGGAGGATTTATTGAGGGCTTCTGCTTATGTTGTTGGGAAGAGTAGGAGTGGGATTGTTTATAAGGTTGTTGGTGGCGGAAAAGGGTCGGTTCCGGCGAGGACTGCGGTGGCTGTTCGGCGGTTAAGTGAGGGCGATGATGGAGGTTTAAGGTTCAAGGATTTTGAGTATGAGGTGGAAGCTATTGGAAGGGTGAGACATCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCTAGTGATGAGAAACTTCTTATCACTGATTTCATTCGCAATGGAAGCTTGCATACTGCTTTGCATGGTGGGCCATCCGATTCATTGCCACCATTATCATGGGCGGCAAGATTAAAAATTGCTCTAGGATCTGCAAGGGGATTGATGTACATACACGAGTTTAGTGGTCGGAAGTATGTCCACGGCAACATAAAATCAACGAAAATACTATTGGACGATGATCTCCATCCTTACATATCCGGCTTCGGTCTTACCCGTCTTTGTTTAGGTACCTTAAAATCGAACACCACATTCACACATAAGAGGCAGAATTCAAACCAGTCTATTTTGACCTCGGCAATGAGTTCAAAATTTGCTGCTTCCTCTAAGAACTACATGGCACCGGAGGTGCGTATGGTTGGTGGAAAGTTCACTCAGAAATGTGATGTGTACTCTTTTGGTATAGTATTGTTAGAACTTTTGACAGGTCGGTTGCCGGATTTAGGACCAGAAAATGATCAGAAGGAGCTCGAGAGTTTTGTGAGGAAAGCGTTCAAGGAGGAACAACCATTGTCAGAGATTATAGATCCAACACTTCTTCCCGAGGTTAATGCTAAAAAACAAGTCGTTGCAGCATTTCATGTTGCACTGAATTGTACAGAGCTTGATCCAGAATTGCGACCGAGAATGAAAACCGTGTCTGAGAGCCTTGATAACATCAAAATTCAGTGA 1992 0.4352 MPPPHNNNVLHISNMFFTTFLFLCLFIPLTSSLNSDGLSLLALKLAIDMDPTGILNSWSDSVSTPCNFEGVTCNKHDRVTQLTLPSKSLTGYIPSELGHLTQLTTLNLSNNNFTKTIPNSLFNTTNNLIILDLSHNSLSGPLPPSFTSLKSLIHCDLSSNFLNGSLPESLTELTALTGTLNLSFNGFSGEIPASLGNLPVEVSLDLRDNNLTGEIPQVGSLLNQGPTAFSGNPGLCGFPLRNLCPYARTKVPDIYPENPDPNPNAVQTGAIRDNERERGGLFIVVGLVLICVGTVVVLMSVVVVRRRRRRLNDGERGFEKGKVEGGEVLGCGEEQKGRFVVVDEGFGFELEDLLRASAYVVGKSRSGIVYKVVGGGKGSVPARTAVAVRRLSEGDDGGLRFKDFEYEVEAIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGGPSDSLPPLSWAARLKIALGSARGLMYIHEFSGRKYVHGNIKSTKILLDDDLHPYISGFGLTRLCLGTLKSNTTFTHKRQNSNQSILTSAMSSKFAASSKNYMAPEVRMVGGKFTQKCDVYSFGIVLLELLTGRLPDLGPENDQKELESFVRKAFKEEQPLSEIIDPTLLPEVNAKKQVVAAFHVALNCTELDPELRPRMKTVSESLDNIKIQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02081 663 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 21 661 IPR046959 -
Trre2g02081 663 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Trre2g02081 663 FunFam Leucine-rich repeat receptor-like kinase 39 150 - -
Trre2g02081 663 SUPERFAMILY Protein kinase-like (PK-like) 360 657 IPR011009 -
Trre2g02081 663 FunFam Leucine-rich repeat receptor-like protein kinase 151 246 - -
Trre2g02081 663 Pfam Protein tyrosine and serine/threonine kinase 362 657 IPR001245 GO:0004672|GO:0006468
Trre2g02081 663 Pfam Leucine rich repeat 102 160 IPR001611 GO:0005515
Trre2g02081 663 Gene3D Phosphorylase Kinase; domain 1 334 438 - -
Trre2g02081 663 ProSiteProfiles Protein kinase domain profile. 355 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02081 663 Gene3D Ribonuclease Inhibitor 28 86 IPR032675 -
Trre2g02081 663 Gene3D Ribonuclease Inhibitor 87 247 IPR032675 -
Trre2g02081 663 Gene3D Transferase(Phosphotransferase) domain 1 439 663 - -
Trre2g02081 663 SUPERFAMILY L domain-like 37 242 - -
Trre2g02081 663 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02081 Trre-Chr2 16931108 16935172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02081 33 661 Receptor kinase-like Gene Family AT3G57830 57.585 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre2g02081 PK_Tyr_Ser-Thr 5.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02081 - - tpra:123899429 1127.46