Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02070 ATGGGTAAGACGAAAAAGAAGAGAAGTAGGGTTCTTGGTGTGGAGAAAACAGCATCTCAACAAGAAATAAAGAAGGCGTATCACAAATTGGCGTTGAGACTTCATCCTGATAAGAATCCTGGTGACGAGGAAGCTAAAGCCAAATTTCAACAATTGCAAAGTGTTATCTCAATTCTTGGAGATGAACAAAAACGGGCAGTGTATGATCAGACTGGTTCTGTTGATTGTGCTGACCTTGGAGGAGATGTTGTTCAGAATCTTCATGAATATTTCAGAACAATGTACAAGAAGGTTACTGAAGCTGATATTGAGGATTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTGATTAATCTTTACAAGGAATGCAAGGGTAATATGAAGAGGTTATTTTGTTCAATGCTTTGTTCGGATGCTAAACTCGACTCACACCGGTTCAAGGATATTATTGATGAGGCTATAGCTTCTGGAGAACTAAAGGAAAAGAAAGCCTACAAGAAATGGGCTAAGAAAATTTCTGAAACCAAGCCACCAACTAGTCCTTTAAGGAGGAAAAAAGCAAATAAGGAACCAAAAACAGATTTGTATGCTATCATATCAAAACGACGAGATGAGAGGAAAGATCGGTTTGATTCTATGTTCTCATCTCTAATTTCAAAATATGGCGGAGGCCATGTGCCAGAACCCTCTGAAGAGGAATTTGAAGCGACACAGAAAAAGATGGAAAGCCGAAGATCCTCAAAAAAGCCAAGGAGAAAGTAA 774 0.3863 MGKTKKKRSRVLGVEKTASQQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQSVISILGDEQKRAVYDQTGSVDCADLGGDVVQNLHEYFRTMYKKVTEADIEDFEANYRGSDSEKNDLINLYKECKGNMKRLFCSMLCSDAKLDSHRFKDIIDEAIASGELKEKKAYKKWAKKISETKPPTSPLRRKKANKEPKTDLYAIISKRRDERKDRFDSMFSSLISKYGGGHVPEPSEEEFEATQKKMESRRSSKKPRRK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02070 257 SMART dnaj_3 6 64 IPR001623 -
Trre2g02070 257 MobiDBLite consensus disorder prediction 175 204 - -
Trre2g02070 257 PRINTS DnaJ domain signature 27 42 IPR001623 -
Trre2g02070 257 PRINTS DnaJ domain signature 44 64 IPR001623 -
Trre2g02070 257 PRINTS DnaJ domain signature 9 27 IPR001623 -
Trre2g02070 257 PRINTS DnaJ domain signature 64 83 IPR001623 -
Trre2g02070 257 SUPERFAMILY Chaperone J-domain 10 82 IPR036869 -
Trre2g02070 257 ProSiteProfiles dnaJ domain profile. 7 72 IPR001623 -
Trre2g02070 257 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 5 257 IPR042977 -
Trre2g02070 257 Gene3D DnaJ domain 3 81 IPR036869 -
Trre2g02070 257 MobiDBLite consensus disorder prediction 224 257 - -
Trre2g02070 257 Pfam DnaJ domain 11 69 IPR001623 -
Trre2g02070 257 CDD DnaJ 11 61 IPR001623 -
Trre2g02070 257 MobiDBLite consensus disorder prediction 230 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02070 Trre-Chr2 16858706 16863741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02070 11 69 C2H2 Transcription Factor Family AT1G74250 42.188 2.76e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02070 K09529 - gmx:100781463 395.586