Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02053 ATGAACGATATTGACTCCGATAGTAGTGGTGGTGGTTATCATCCACAGCCACCACCGCATCAAGAACTTGTGACTCAGTATAAGGCTGCTCTTGCTAAGCTTACTTTCAACTCGAAACTTATAATTACCAATTTGGCTATAATTGCTGGAGAGAATCTTTCTGCTGCAAAATCAATTGCTGGAGTTGTTTGTGCTAACATTCTAGAGGTACCAAGTGACCAAAAGACAGTATTGTTAAGAATATTGGGTGAGATTTTACATAAAATACTTTGCTGCCAGACTACCCGAGGACCTCTCTAG 300 0.4033 MNDIDSDSSGGGYHPQPPPHQELVTQYKAALAKLTFNSKLIITNLAIIAGENLSAAKSIAGVVCANILEVPSDQKTVLLRILGEILHKILCCQTTRGPL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02053 99 ProSiteProfiles CID domain profile. 19 99 IPR006569 -
Trre2g02053 99 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 22 75 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Trre2g02053 99 SUPERFAMILY ENTH/VHS domain 19 87 IPR008942 -
Trre2g02053 99 Gene3D - 16 95 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02053 Trre-Chr2 16626973 16628059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02053 7 89 C2H2 Transcription Factor Family AT4G04885 45.783 2.08e-16 71.2