Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02052 ATGGCATTGTATAATAAACCTACTGAAGATCAATGTTTGCACAAACTTCTGCTTGATGAAAAGAAGTATATTCAACCTTTATTTGTTAAATTAAACAAAGATATATTCAATGTGTTAGTCCAACCTTTGGCACTTCCACACCCATCTGAGGAGCTCATTCAAGTTGTTGATTTGGAGAGAGTGGTTCTGTCCGATGCTCACCTTGCAAAGCTTATTCTCTGCAATACAAAAGCTACAAGTAAACAAGCGCTTCTTCTCCATGCTGAAGGAAAGAAACACTGGGCAAAAGCCCGAGCCTTCCATGCTTCGCAGCAGCCACCAGTCCAGACAGATAAACCTGCCCCTGAAGCAAAGGATGCCGTGGAGACTGCTTCTAATAGCACGGCAAAAGATGACAAAAATGCAGAGCAGCCAAAATTTCAAGAGTCTTCTGAACAAAATAACTTGAACCAGGGAGTGAATGTTATGTGTTCTCCTGCATTGCTATGA 489 0.4151 MALYNKPTEDQCLHKLLLDEKKYIQPLFVKLNKDIFNVLVQPLALPHPSEELIQVVDLERVVLSDAHLAKLILCNTKATSKQALLLHAEGKKHWAKARAFHASQQPPVQTDKPAPEAKDAVETASNSTAKDDKNAEQPKFQESSEQNNLNQGVNVMCSPALL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02052 162 MobiDBLite consensus disorder prediction 99 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02052 Trre-Chr2 16618459 16623828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02052 56 139 C2H2 Transcription Factor Family AT2G19380 40.476 6.71e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02052 K15263 - gmx:100790703 113.62