Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02037 ATGAGGCATTTACCTAAACATCCTAACATTGTTTCGTTGAAGTATACTTATGAAGACGACAATGATGTTCATCTTGTTATGGAACTCTGTCAAGGTCGTGAACTTGTTGATCGGATTGTTGCTAGAGGACACTACACCGAGCGCGCCGCCGCTTCTGTTGTTAAAGCCATCATCCATTTGTTCAGATGTGCCACAAACATGGAGTCATGCATCGGGATCTCAAACCCGAGAACTTTGTGTTTGCAGACAAAAAGGAAACATCACCTTTGA 270 0.4296 MRHLPKHPNIVSLKYTYEDDNDVHLVMELCQGRELVDRIVARGHYTERAAASVVKAIIHLFRCATNMESCIGISNPRTLCLQTKRKHHL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02037 89 Pfam Protein kinase domain 4 58 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02037 89 ProSiteProfiles Protein kinase domain profile. 1 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02037 89 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 59 - -
Trre2g02037 89 SUPERFAMILY Protein kinase-like (PK-like) 1 58 IPR011009 -
Trre2g02037 89 Gene3D Phosphorylase Kinase; domain 1 12 29 - -
Trre2g02037 89 Gene3D Transferase(Phosphotransferase) domain 1 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02037 Trre-Chr2 16469703 16470443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02037 1 62 EF-hand Containing Proteins AT2G41860 74.194 9.68e-28 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g02037 Pkinase 7.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02037 K13412 - sind:105162537 102.834