Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02036 ATGGCCCCTGAAGTATTACAGAGAAATTATGGTCCCAAAATTGATATCTGGAGTGCTGGAGGCATTCTTTACATCTTACTTTGTGGTGTCCCCCCATTTTGGGCAGAAACTGAGCAGGGAGTTGCGCAAGCAATTATGCGATCGTTTATTGACTATAAAAGGGAGCCATGGACAAAGGTTTCCGATAATGCGAAAGACCTTGTTAAGAAGATGCTTGATCCCGACCCAAAGCGTCGGCTTACTGCACATGAAGTGTTAGATCATCCATGGTTGCAGAATGTAAAGACAACTCCTAATGTTTTATTGGGAGAAAGTCCGAGCATGGCTCATGCAATTCTCTGTAATAAACAAACTTAA 357 0.4258 MAPEVLQRNYGPKIDIWSAGGILYILLCGVPPFWAETEQGVAQAIMRSFIDYKREPWTKVSDNAKDLVKKMLDPDPKRRLTAHEVLDHPWLQNVKTTPNVLLGESPSMAHAILCNKQT 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02036 118 Pfam Protein kinase domain 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02036 118 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02036 118 SUPERFAMILY Protein kinase-like (PK-like) 1 97 IPR011009 -
Trre2g02036 118 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Trre2g02036 118 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 98 - -
Trre2g02036 118 FunFam Calcium-dependent protein kinase 7 36 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02036 Trre-Chr2 16468170 16469506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02036 1 105 EF-hand Containing Proteins AT3G57530 80.000 2.24e-60 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g02036 Pkinase 8.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02036 K13412 - gmx:100815320 194.897