Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02035 ATGGAAAATTGCTGTGCAAATCTATGCGGTGTGTTCAAGAAACAGAAACAAAAGCAAAAACCCAGGCCGAACAAATGTAGCAACAAATTGGTGGTGTTAAAAGAGCCTACTGGCCGAGAGATTCGGCTACGATACGAATTAGGGAGGGAATTAAGGAGAAGTGAATTCGGAATAACGTATTTATGTAAAGATAGACAAACGGGAGAAGAACTTGCTTGTAAGTCGATTTCGAAGAATGAGCTTAGAACTGCGATTGATATTGAAGATGTTAGAAGAGAAGTTGAAATCATGAGGCATTTACCTAAACACCCTAACATAGTTTCCTTGAAGTATACTTATGAAGATGATGATGATGTTCATCTTCTTATGGAACACTGTGAAGGTGGTGGTGAATCTGGTGATGACCTTCTTGATCGCATCGTCTCTAGAGGAGGCTATAACGAAAGCTCCGCAGCTTCTATCATTAAAACCATCGTCCATGCTGTTCAGATGTGCCACAAACATGGCGTGATGCATCGGAATCTCAAAACCGAGAACTTTTTGTGTGCAAACAGGAAAGAAACAGCATATTTGAAATTAACTGACTTTCGTTCGTCAATTTTCTTTAAACCAGGTGAAAGATTGAATCAGATTGTTGGGAACCTATATTACATGGCCCCTGAAGTATTACAGAGAAATTATGGCCCTGAAATTGATATCTGGAGTGCTGGTGTCATTCTTTACATCTTACTTTGTGGTTTCCCTCCGTTTTGGGCAGAAGCGGAGCAGGAAGTTGCTAAAGCAATTACAAAATCTATTGTTGACTTTGAAAGGAACCCATGGCCAATGGTTTCTGATAATGCTAAAGACCTTGTTAAAAAGATGCTTGATCCTGACCCAAAGCTCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGATCAACAACCTTGTTATGAAGAAACCCGATGAGGCAAAAGACCTCGTTCAGAAGATGCTTACTGCACATGAACGGTTGGGTCATCCATGGTTGCTGAATCCAAAGACGGCTCCTAATGTTTCATTGGGAGATACAGTCAGAGGAAAGCTCTTGCAATTTTCTATAATGAAGCAACTTACAATAACAACATCGATGGTGATTGCAGAGCATTTGTCTCGTGAAGAATTCTGGGTGAGGGATACAGGAATTACGGGCTACACTAACTGTTGGTGCACAAAGTTTCAATTAAATTATGAAGAGTTTTTAGCCTTTTCTCATCATCTGAGAAAGAGATCGCATGAAGAGTTCGTCGATAGTGCATTTCAATTTTTTGATAAAAAACAATCTGGGTATATTGAACTGGAGGAGTTACATAAGGCCTTAGCTGCTGAGACTGAATCGCACTGTAAAGAAGTCATTAAGGCAATTATGCATGATGTGGCAACAGATGAGGATGGAAAAATTAGTTATGAGGAAATTACAAATCGGAGTTTGAAATTAATGAGGGAGTGGTTGTCATCAGAAATCGAATGCATATATGATGAAGATGTCGTCAGCAAATTTCTTTTTGGTTCGTTATAA 1545 0.3961 MENCCANLCGVFKKQKQKQKPRPNKCSNKLVVLKEPTGREIRLRYELGRELRRSEFGITYLCKDRQTGEELACKSISKNELRTAIDIEDVRREVEIMRHLPKHPNIVSLKYTYEDDDDVHLLMEHCEGGGESGDDLLDRIVSRGGYNESSAASIIKTIVHAVQMCHKHGVMHRNLKTENFLCANRKETAYLKLTDFRSSIFFKPGERLNQIVGNLYYMAPEVLQRNYGPEIDIWSAGVILYILLCGFPPFWAEAEQEVAKAITKSIVDFERNPWPMVSDNAKDLVKKMLDPDPKLRLTAQEVLDHPWLINNLVMKKPDEAKDLVQKMLTAHERLGHPWLLNPKTAPNVSLGDTVRGKLLQFSIMKQLTITTSMVIAEHLSREEFWVRDTGITGYTNCWCTKFQLNYEEFLAFSHHLRKRSHEEFVDSAFQFFDKKQSGYIELEELHKALAAETESHCKEVIKAIMHDVATDEDGKISYEEITNRSLKLMREWLSSEIECIYDEDVVSKFLFGSL 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02035 514 CDD STKc_CAMK 44 307 - -
Trre2g02035 514 ProSiteProfiles Protein kinase domain profile. 45 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02035 514 Gene3D Transferase(Phosphotransferase) domain 1 133 379 - -
Trre2g02035 514 Pfam EF-hand domain pair 428 481 IPR002048 GO:0005509
Trre2g02035 514 SUPERFAMILY Protein kinase-like (PK-like) 32 331 IPR011009 -
Trre2g02035 514 SUPERFAMILY EF-hand 403 484 IPR011992 -
Trre2g02035 514 Gene3D - 401 485 - -
Trre2g02035 514 Gene3D Phosphorylase Kinase; domain 1 34 126 - -
Trre2g02035 514 ProSiteProfiles EF-hand calcium-binding domain profile. 420 455 IPR002048 GO:0005509
Trre2g02035 514 FunFam Calcium-dependent protein kinase 1 47 131 - -
Trre2g02035 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 311 - -
Trre2g02035 514 Pfam Protein kinase domain 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02035 514 CDD EFh 428 480 IPR002048 GO:0005509
Trre2g02035 514 FunFam calcium-dependent protein kinase 13 136 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02035 Trre-Chr2 16454568 16465311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02035 1 482 EF-hand Containing Proteins AT5G19450 52.552 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g02035 Pkinase 4.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02035 K13412 - qsu:112027620 530.791