Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02034 ATGGAAAATTGCTGTGCAAATCTATGCGGTGTGTTCAAGAAACAGAAACAAAAGCAAAAACCCAGGCCGAACAAATGTAGCAACAAATTGGTGGTGTTAAAAGAGCCTACTGGCCGAGAGATTCGGCTACGATACGAATTAGGGAGGGAATTAAGGAGAAGTGAATTCGGAATAACGTATTTATGTAAAGATAGACAAACGGGAGAAGAACTTGCTTGTAAGTCGATTTCGAAGAATGAGCTTAGAACTGCGATTGATATTGAAGATGTTAGAAGAGAAGTTGAAATCATGAGGCATTTACCTAAACACCCTAACATAGTTTCCTTGAAGTATACTTATGAAGATGATGATGATGTTCATCTTCTTATGGAACACTGTGAAGGTGGTGGTGAATCTGGTGATGACCTTCTTGATCGCATCGTCTCTAGAGGAGGCTATAACGAAAGCTCCGCAGCTTCTATCATTAAAACCATCGTCCATGCTGTTCAGATGTGCCACAAACATGGCGTGATGCATCGGAATCTCAAAACCGAGAACTTTTTGTGTGCAAACAGGAAAGAAACAGCATATTTGAAATTAACTGACTTTCGTTCGTCAATTTTCTTTAAACCAGGTGAAAGATTGAATCAGATTGTTGGGAACCTATATTACATGGCCCCTGAAGTATTACAGAGAAATTATGGCCCTGAAATTGATATCTGGAGTGCTGGTGTCATTCTTTACATCTTACTTTGTGGTTTCCCTCCGTTTTGGGCAGAAGCGGAGCAGGAAGTTGCTAAAGCAATTACAAAATCTATTGTTGACTTTGAAAGGAACCCATGGCCAATGGTTTCTGATAATGCTAAAGACCTTGTTAAAAAGATGCTTGATCCTGACCCAAAGCTCCGGCTTACTGCACAGGAAGTGTTAGGTCATCCATGGTTGCTGAATCCAAAGACGGCTCCTAATGTTTCATTGGGAGATACAGTCAGAGGAAAGCTCTTGCAATTTTCTATAATGAAGCAACTTACAATAACAACATCGATGGTGATTGCAGAGCATTTGTCTCGTGAAGAATTCTGGGTGAGGGATACAGGAATTACGGGCTACACTAACTGTTGGTGCACAAAGTTTCAATTAAATTATGAAGAGTTTTTAGCCTTTTCTCATCATCTGAGAAAGAGATCGCATGAAGAGTTCGTCGATAGTGCATTTCAATTTTTTGATAAAAAACAATCTGGGTATATTGAACTGGAGGAGTTACATAAGGCCTTAGCTGCTGAGACTGAATCGCACTGTAAAGAAGTCATTAAGGCAATTATGCATGATGTGGCAACAGATGAGGATGGAAAAATTAGTTATGAGGAAATTACAAATCGGAGTTTGAAATTAATGAGGGAGTGGTTGTCATCAGAAATCGAATGCATATATGATGAAGATGTCGTCAGCAAATTTCTTTTTGGTTCGTTATAA 1452 0.3933 MENCCANLCGVFKKQKQKQKPRPNKCSNKLVVLKEPTGREIRLRYELGRELRRSEFGITYLCKDRQTGEELACKSISKNELRTAIDIEDVRREVEIMRHLPKHPNIVSLKYTYEDDDDVHLLMEHCEGGGESGDDLLDRIVSRGGYNESSAASIIKTIVHAVQMCHKHGVMHRNLKTENFLCANRKETAYLKLTDFRSSIFFKPGERLNQIVGNLYYMAPEVLQRNYGPEIDIWSAGVILYILLCGFPPFWAEAEQEVAKAITKSIVDFERNPWPMVSDNAKDLVKKMLDPDPKLRLTAQEVLGHPWLLNPKTAPNVSLGDTVRGKLLQFSIMKQLTITTSMVIAEHLSREEFWVRDTGITGYTNCWCTKFQLNYEEFLAFSHHLRKRSHEEFVDSAFQFFDKKQSGYIELEELHKALAAETESHCKEVIKAIMHDVATDEDGKISYEEITNRSLKLMREWLSSEIECIYDEDVVSKFLFGSL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02034 483 CDD STKc_CAMK 44 307 - -
Trre2g02034 483 Pfam Protein kinase domain 47 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02034 483 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 447 - -
Trre2g02034 483 CDD EFh 397 449 IPR002048 GO:0005509
Trre2g02034 483 Gene3D Phosphorylase Kinase; domain 1 34 126 - -
Trre2g02034 483 ProSiteProfiles EF-hand calcium-binding domain profile. 389 424 IPR002048 GO:0005509
Trre2g02034 483 ProSiteProfiles Protein kinase domain profile. 45 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g02034 483 SUPERFAMILY Protein kinase-like (PK-like) 30 319 IPR011009 -
Trre2g02034 483 Gene3D Transferase(Phosphotransferase) domain 1 133 349 - -
Trre2g02034 483 Pfam EF-hand domain pair 397 450 IPR002048 GO:0005509
Trre2g02034 483 Gene3D - 365 468 - -
Trre2g02034 483 SUPERFAMILY EF-hand 372 454 IPR011992 -
Trre2g02034 483 FunFam calcium-dependent protein kinase 13 136 316 - -
Trre2g02034 483 FunFam Calcium-dependent protein kinase 1 47 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02034 Trre-Chr2 16454568 16465311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02034 1 461 EF-hand Containing Proteins AT5G19450 55.118 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trre2g02034 Pkinase 8.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02034 K13412 - qsu:112027620 544.273