Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02016 ATGGAAGACCGCTGCAATTCACTCATTCCATCGGATATTGAAACAAATAGGTGTGAAGAAGTGTTGAGACACTGTCGACCAAAGGAGTGTAAACCTGTGAACCAATATTTAGATGATTGTGATGTGGTTCCTACACCACAGGATTGGATGAAATTTAATTCAGAGGATGAGGTAAGATCATATTATACAAAATATGCAAACCAAGAAGGTTTTGGCATCATGACAAGAACCTCAAAAGAGGGAGCTCGTGGTAAGGTTGTCTATTTTATACTTGCATGTTCAAGACAAGGAAGTAGAAGAAACAGTAAAAAGAGTCCTGTCACAAATTGTTCATCAGGGGAACAGAAGTGTGAAGCCAGGATAATTGTTTGTTTATGCGAAGATGATGCTTACCGTTTTAAATCTATTACACTTAATCACAATCATGAATTGAATCCAAATCAAGTCAAGTCTAGAAATAGTGCTGATACTAACAAGAGGTTGAAAAGGACATTAGATCCAAATGATCAAGCTGAGAAAGGAGTGAAGAGTTTTGGGTCTCTTGTGGTTAAATCTGAGGCCTGTGAAGATCTGGCATTTTGTAAACAAGGTTTTAGAAATTACATTCCGAAAGAGAAACGACTTATTGGGGAAGATGGAGATGGTCATGCCCTTCATAAGTATTTTATGTGGATGCAAGAACAAGACAACAATTTCTTTTACGCAATTGACTTTGATGATTCCTTTGGTGTGAAGAACGTTTTTTGGGCCGATGGAAGGAGCAGAGCTGCATACAAGTTATTTGGTGATGTGGTGAAATTTGATTCTACATATCTCTCTAACCAATACAAAATACCTCTTACATTCTTGGTTGGAGTTAACCATCATGGACAATCGATACTTTTCGGCTGTGGGTTATTGTCCTCTGAAGACACACAATCTTTTGTATGGTTGTTTCAATCATGGCTGGTTTGTATGTCTGGTGTTCAACCGAAAGGTATCATAACAGATCAACACAAGGCTGTGCTGAGTGCAATTGGTATTGTATTCCCCTCCACTCGACATTCTTGGTGTTTATCGCATATTATGAAAAAGCTTCCTCAAAATATAGGTGGACACGCTGAGTATGATTCTTTAAGTTACCATTTGCAGAGAGTTGTATATGATTCATTAACTACAAATGAATTTGAAACAGCTTGGAAGATGATTGTGGAGGAATTTGACCTAGAGGACAATGAATGGTTGAGGGAGTTGTACCTTGAAAGACACAGATGGGTTCCTACATTTATAAGATGTAGTTTTTGGGCTGGAATGTCTGCTACCCAACACGCCAAAGTAGAAAAAGAGTTTGAAGCTGATTTTCGGTCATATAGTAGCACTCTTGCATGTGTTACAAAGTCTCCAATTGAACGGCAATTCCAATCTGCATACACTCATGCAAAGTTTCTAGAGGTTCAGAAAGAATTTATAGGGAAAGCTGATTGTAACGTTTGTATTGCACGTGTTGAAGGTTCTATTTGTCACTATAATGTCATTGAAGATACAATGATGGGTGATAAACCCAAAGAAACCATGTTTCAAGTCACATTTGACAGGGTTAACTGTGATGTGAAGTGCATATGCAACATGTTTGAATTTAAAGGTATACTTTGTAGACACTCACTTGCTATACTATCTATGGAGCGAGTAAAAGAGATCCCTTGTAAATACATCTTGAATAGATGGATGAAAAGTATGAAGAGAAGGCATACATATGTAAAGACAAGCTATGCTGCCAAGCAGCTTCAACCTCAGATTCAAAATTTTGATTTATTATGCGAACAATTTGAGAGTGTTGCTGAGGTTGCTTCTGAATTCGAGGAAACAAGTTCTTTTGTAAAGAATACCATTTGTGACTTGAAAGAGAAGTTAGAATTGTGGGCATCTCGTTTGAGAAACCCATCTGATATGCCAATAATAATATATGTATTTAATCCCCAAAGACTACTCTTGAAATCATAA 1980 0.3732 MEDRCNSLIPSDIETNRCEEVLRHCRPKECKPVNQYLDDCDVVPTPQDWMKFNSEDEVRSYYTKYANQEGFGIMTRTSKEGARGKVVYFILACSRQGSRRNSKKSPVTNCSSGEQKCEARIIVCLCEDDAYRFKSITLNHNHELNPNQVKSRNSADTNKRLKRTLDPNDQAEKGVKSFGSLVVKSEACEDLAFCKQGFRNYIPKEKRLIGEDGDGHALHKYFMWMQEQDNNFFYAIDFDDSFGVKNVFWADGRSRAAYKLFGDVVKFDSTYLSNQYKIPLTFLVGVNHHGQSILFGCGLLSSEDTQSFVWLFQSWLVCMSGVQPKGIITDQHKAVLSAIGIVFPSTRHSWCLSHIMKKLPQNIGGHAEYDSLSYHLQRVVYDSLTTNEFETAWKMIVEEFDLEDNEWLRELYLERHRWVPTFIRCSFWAGMSATQHAKVEKEFEADFRSYSSTLACVTKSPIERQFQSAYTHAKFLEVQKEFIGKADCNVCIARVEGSICHYNVIEDTMMGDKPKETMFQVTFDRVNCDVKCICNMFEFKGILCRHSLAILSMERVKEIPCKYILNRWMKSMKRRHTYVKTSYAAKQLQPQIQNFDLLCEQFESVAEVASEFEETSSFVKNTICDLKEKLELWASRLRNPSDMPIIIYVFNPQRLLLKS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02016 659 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 38 631 IPR031052 GO:0006355
Trre2g02016 659 MobiDBLite consensus disorder prediction 144 166 - -
Trre2g02016 659 ProSiteProfiles Zinc finger SWIM-type profile. 519 555 IPR007527 GO:0008270
Trre2g02016 659 Pfam MULE transposase domain 264 358 IPR018289 -
Trre2g02016 659 Pfam SWIM zinc finger 528 552 IPR007527 GO:0008270
Trre2g02016 659 SMART 26again6 530 557 IPR006564 GO:0008270
Trre2g02016 659 Pfam FAR1 DNA-binding domain 60 146 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02016 Trre-Chr2 16302907 16305081 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g02016 MULE 2.9e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02016 - K17604 gmx:102663358 706.057