Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02015 ATGGAAGACCGCTGCAATTCACTCATTCCATCGGATATTGAAACAAATAGGTGTGAAGAAGTGTTGAGACACTGTCGACCAAAGGAGTGTAAACCTGTGAACCAATATTTAGATGATTGTGATGTGGTTCCTACACCACAGGATTGGATGAAATTTAATTCAGAGGATGAGGTAAGATCATATTATACAAAATATGCAAACCAAGAAGGTTTTGGCATCATGACAAGAACCTCAAAAGAGGGAGCTCGTGGTAAGGTTGTCTATTTTATACTTGCATGTTCAAGACAAGGAAGTAGAAGAAACAGTAAAAAGAGTCCTGTCACAAATTGTTCATCAGGGGAACAGAAGTGTGAAGCCAGGATAATTGTTTGTTTATGCGAAGATGATGCTTACCGTTTTAAATCTATTACACTTAATCACAATCATGAATTGAATCCAAATCAAGTCAAGTCTAGAAATAGTGCTGATACTAACAAGAGGCATACATATGTAAAGACAAGCTATGCTGCCAAGCAGCTTCAACCTCAGATTCAAAATTTTGATTTATTATGCGAACAATTTGAGAGTGTTGCTGAGGTTGCTTCTGAATTCGAGGAAACAAGTTCTTTTGTAAAGAATACCATTTGTGACTTGAAAGAGAAGTTAGAATTGTGGGCATCTCGTTTGAGAAACCCATCTGATATGCCAATAATAATATATGTATTTAATCCCCAAAGACTACTCTTGAAATCATAA 735 0.3633 MEDRCNSLIPSDIETNRCEEVLRHCRPKECKPVNQYLDDCDVVPTPQDWMKFNSEDEVRSYYTKYANQEGFGIMTRTSKEGARGKVVYFILACSRQGSRRNSKKSPVTNCSSGEQKCEARIIVCLCEDDAYRFKSITLNHNHELNPNQVKSRNSADTNKRHTYVKTSYAAKQLQPQIQNFDLLCEQFESVAEVASEFEETSSFVKNTICDLKEKLELWASRLRNPSDMPIIIYVFNPQRLLLKS 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02015 244 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 32 170 - -
Trre2g02015 244 Pfam FAR1 DNA-binding domain 60 146 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02015 Trre-Chr2 16302907 16305081 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g02015 FAR1 1.6e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02015 - K01807 ccaj:109796345 119.012