LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g01979	ATGGAGTCGGTGGTGGGAGTGACGGAGACAAGTAGCGGGAAGATGTTCGGAGGTTACAACAAGAGATACAAACATCACAGTCAAACTCTTGGTTGTTCAATGAACTTTCACATTTACTTCCCTAACAATTCCGATAATAAACCATTCCCCGTTCTTTATTGGCTCTCCGGTCTCACTTGCTCCGACGAGAATTTCATTTTCAAGTCCGGTGCTCAACGCGCCGCCTCTCAATACGGCGTTGCCTTGATCGCCCCCGACACTTCTCCACGAGGCTTGAATGTTGAAGGAGAATCCGATTCCTGGGACTTTGGTGTAGGTGCAGGATTTTATCTCAATGCTACACAAGAGAAATGGAAGAATTGGCGCATGTATGACTATGTTGTCAAGGAATTGCCAGAGCTTCTAAAAGATAACTTTCCACAGCTTGACACATCCAAAGCTTCAATATTTGGCCACTCTATGGGTGGGCATGGTGCACTAACTATCTACCTAAAAAATCTGGATAAATATAAGTCAGTTTCTGCCTTTGCACCAGTAGCAAATCCTACAAATTGTCCTTGGGGACAGAAAGCATTCACTAATTATCTAGGTGGCAATAAATCTGATTGGGAGGATTACGACGCCACTTATTTGGTGAGAAAGCATCCCAATGTATCTACCACCATTTTGATTGATCAGGGGGAAGATGACAAATTTTTGCATGATCAACTGCTGCCACACAAGTTTGAAGAGGCGTGCAAGAATGGCAATGTTCCGCTGTTGTTACGTCTTCAACCTGGTTATGATCATTCCTACTATTTTATTGCCACCTTCATTGATGATCACATCAAGCATCATGCTCAAGCTCTTAAGGCTTAA	858	0.4347	MESVVGVTETSSGKMFGGYNKRYKHHSQTLGCSMNFHIYFPNNSDNKPFPVLYWLSGLTCSDENFIFKSGAQRAASQYGVALIAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPELLKDNFPQLDTSKASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPVANPTNCPWGQKAFTNYLGGNKSDWEDYDATYLVRKHPNVSTTILIDQGEDDKFLHDQLLPHKFEEACKNGNVPLLLRLQPGYDHSYYFIATFIDDHIKHHAQALKA	285

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre2g01979	285	Gene3D	alpha/beta hydrolase	8	284	IPR029058	-
	Trre2g01979	285	NCBIfam	S-formylglutathione hydrolase	11	283	IPR014186	GO:0018738\|GO:0046294
	Trre2g01979	285	Pfam	Putative esterase	27	277	IPR000801	-
	Trre2g01979	285	FunFam	S-formylglutathione hydrolase	7	285	-	-
	Trre2g01979	285	SUPERFAMILY	alpha/beta-Hydrolases	10	284	IPR029058	-
	Trre2g01979	285	PANTHER	S-FORMYLGLUTATHIONE HYDROLASE	7	284	IPR014186	GO:0018738\|GO:0046294

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g01979	Trre-Chr2	16060783	16065450	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g01979	6	284	Carbohydrate Esterase	AT2G41530	78.571	1.15e-168	466

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g01979	K01070		-	gmx:100786814	504.597

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