Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01979 ATGGAGTCGGTGGTGGGAGTGACGGAGACAAGTAGCGGGAAGATGTTCGGAGGTTACAACAAGAGATACAAACATCACAGTCAAACTCTTGGTTGTTCAATGAACTTTCACATTTACTTCCCTAACAATTCCGATAATAAACCATTCCCCGTTCTTTATTGGCTCTCCGGTCTCACTTGCTCCGACGAGAATTTCATTTTCAAGTCCGGTGCTCAACGCGCCGCCTCTCAATACGGCGTTGCCTTGATCGCCCCCGACACTTCTCCACGAGGCTTGAATGTTGAAGGAGAATCCGATTCCTGGGACTTTGGTGTAGGTGCAGGATTTTATCTCAATGCTACACAAGAGAAATGGAAGAATTGGCGCATGTATGACTATGTTGTCAAGGAATTGCCAGAGCTTCTAAAAGATAACTTTCCACAGCTTGACACATCCAAAGCTTCAATATTTGGCCACTCTATGGGTGGGCATGGTGCACTAACTATCTACCTAAAAAATCTGGATAAATATAAGTCAGTTTCTGCCTTTGCACCAGTAGCAAATCCTACAAATTGTCCTTGGGGACAGAAAGCATTCACTAATTATCTAGGTGGCAATAAATCTGATTGGGAGGATTACGACGCCACTTATTTGGTGAGAAAGCATCCCAATGTATCTACCACCATTTTGATTGATCAGGGGGAAGATGACAAATTTTTGCATGATCAACTGCTGCCACACAAGTTTGAAGAGGCGTGCAAGAATGGCAATGTTCCGCTGTTGTTACGTCTTCAACCTGGTTATGATCATTCCTACTATTTTATTGCCACCTTCATTGATGATCACATCAAGCATCATGCTCAAGCTCTTAAGGCTTAA 858 0.4347 MESVVGVTETSSGKMFGGYNKRYKHHSQTLGCSMNFHIYFPNNSDNKPFPVLYWLSGLTCSDENFIFKSGAQRAASQYGVALIAPDTSPRGLNVEGESDSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPELLKDNFPQLDTSKASIFGHSMGGHGALTIYLKNLDKYKSVSAFAPVANPTNCPWGQKAFTNYLGGNKSDWEDYDATYLVRKHPNVSTTILIDQGEDDKFLHDQLLPHKFEEACKNGNVPLLLRLQPGYDHSYYFIATFIDDHIKHHAQALKA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01979 285 Gene3D alpha/beta hydrolase 8 284 IPR029058 -
Trre2g01979 285 NCBIfam S-formylglutathione hydrolase 11 283 IPR014186 GO:0018738|GO:0046294
Trre2g01979 285 Pfam Putative esterase 27 277 IPR000801 -
Trre2g01979 285 FunFam S-formylglutathione hydrolase 7 285 - -
Trre2g01979 285 SUPERFAMILY alpha/beta-Hydrolases 10 284 IPR029058 -
Trre2g01979 285 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 7 284 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01979 Trre-Chr2 16060783 16065450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01979 6 284 Carbohydrate Esterase AT2G41530 78.571 1.15e-168 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01979 K01070 - gmx:100786814 504.597