Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre2g01977 | ATGGATTACACTAACAATTCCAATCACTCCCTTTCCTACTCCACTCTCTTCAATCTTCAGTCTTTGGTGAATTTTCAACTTCCACAACAAGATGATGAATTTGATTATTACGGCAATAGTAGTCAGGACGAAGAAGAAAGCAGAGATAGTCGTCGAGGTGGTGGGGGAGCAATTGGAAATCACAGTAACGGGAATGTGCATTCAAAGGATGTGAATTTGTCGAAAAATAAAAGGGTGCGATCTCAAAACAGCGATGACGAGGACAGAGGAAGTTTTTATGGGGCATACATGACAGAGGAGAAATACCGCTCAATGTTGGGTGACCATGTTCAGAAATACAAGAGGAGGTCTAAGGATATTGCTTCTAGTCATGCACAAAATCGGGGTGCTGTCCCGCTTGTCAAAAGTAATAATAATGGATTAAAAGCTCAGAAGCTAGGGAATGATAACCGGGGAGGATTGCATGCTGCTGAGACTTTATCTGAATGGTTATATAATTCCAATTCTCAGAAACAAGAAAACTACCATAATGCAGATTTAGTGCAGAGAAGAAATGGCGCTGATAGGGTTATGTATGAACCTTCTATTTTAGAAATTGGGGATGGTATCACATACAAGATTCTTCCAATTTATGACAAGCTGGCTACAACGCTGAACCTTCCAAGCTTCTCAGATATCCATGTGGATGAATTTTACTTGAAGGGTACCTTGGATTTGGGGTCTTTGGCTGCAATGATGGCTGCTGACAAAAGGTTAGGAAATAAAATCCGAGCAGGCATGGGGGAACCCCTATTTCAATATCAATCACTTCAGGAGCGAATAAAGGCCATGTCAGCTTCTAATTCACCTCAAAAATTTAGTTTGAATGTGTCTGATATTGGTTTGAATTCATCCATTCCGGAGGGGGCTGCTGGAAACATAAAGCGGTCTATTTTGTCCGAGGGTGGTGTATTGCAGGTTTATTATGTAAAGGTTTTGGAAAAAGGTGACACTTACGAGATCATTGAGCGAAGCCTACCCAAGAAGCAAAAGGTAAAGAAAGATCCTGCTTCAATTGAGAAGGAGGAAATGGATAGAATTGGAAAGATTTGGGTTAGATTGAAAATTAGTAGATCACTTAAATGGAATAGGAGTGCTAGCATTCGCACCCGGAAACTATCTAGAGACATGTTGCTGTTCTGGAAACGAATAGATAAGGAGATGGCCGAAGTGAGGAAAAGAGAAGAGAAAGAAGCCGCTGAAGCTTTAAGACGTGAACAGGAGCTCCGAGAGGCAAAGAGACAGCAGCAAAGGCTTAATTTTCTGATACAACAAACTGAGATCTACAGTCATTTTATGCAGAACAAGTCAGATTTACTATCTTCGGAAGCTTTACCCGTGGCAGAGGAAAAAACAAATGATCAAGATGCACCGTTCATCTCATCAGATGCTGGGCCTAACGAGGAAGAAGATCCAGAAGAGGCTGAATTGAAGAAAGAAGCTTTGAAGGCTGCTCAAGAAGCAGTCTTTAAGCAGAAAAAGTTGACTAATGCTTTTGACAGTGAATGTTTGAGGCTGCGGCAGGTGGGTGAAGCTGATCCACTTATGCAGGAAGTTGCAGGAGCGAGTAACATTGATTTGCAAACCCCATCAACCATGCCAGTGGCATCCACAGTTCAAACACCTGAATTATTTAAAGGTTGTCTAAAAGAATACCAGCTGAAAGGTCTCCAATGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAGATGGGACTTGGAAAGACCATACAAGCTATGGTTTTTTTAGCCCATTTAGCTGAGGAAAAAAACATATGGGGACCTTTTCTGGTTGTTGCACCTGCTTCTGTATTGAACAATTGGAATGAGGAACTTGAGCGCTTCTGCCCTGAACTTAAAAGACTTCCGTATTGGGGAGGGCTTTCAGAGAGGACAGTACTAAGGAAAAGTATTAACCCAAAGGACCTTTATCGTAGGGAAGCTAAATTTCACGTTCTCATCACAAGCTATCAGCTATTAGTATCCGATGAGAAGTATTTTCGTCGCGTGAAATGGCAGTATATGGTTTTAGACGAAGCCCAGGCAATTAAAAGTGCAAACAGTATAAGATGGAAGACACTTCTCAGCTTTAATTGCCGGAATCGTCTTCTGCTGACTGGTACACCCATTCAGAATAATATGGCAGAGTTGTGGGCTCTTCTGCACTTCATCATGCCAACTTTATTTGACAGCCACGAGCAGTTTAACGAGTGGTTCTCAAAAGGAATTGAGAACCATGCAGAACACGGGGGTACTTTGAATGAGCACCAGCTTAATAGATTGCACTCAATTCTAAAACCTTTCATGCTACGGCGTGTTAAAAAAGACGTAGTTTCTGAGTTGACACAAAAAACCGAGGTTATGGTGCATTGCAAGTTGAGTTCTCGGCAGCAGGCTTTTTACCAAGCAATTAAGAACAAGATATCTCTGGCTGAACTATTTGATAGTAATCGTGGGCAGCTTAACGAGAAGAAAATTCTAAATTTGATGAATATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCTGAGTTGTTCGAAAGGAATGAAGGAAGCACATATTTTTACTTTGGTGAGATTCCAAATTCCCTTCCACCTCCTCCATTTGGTGAGTTGGAGGATGTTTACTATGCTGGAGGTCTCAACCCCTTATCTTTTCAGATACCAAAGCTTGTCTATCAGGATATTATGCAAAGCTCTGAGACTCTCAGTTCAGCTGTTGGTCGTGGTGTCTCTAGAGAAACTTTTCAGAAACATTTTAATATTTTTCAACCAGAAAATGTCCATCGATCTATTTTCTCAGAAGAAACAAATGTTGAAAGTGGAAACTTTGGTTTTACCCATTTGATGGATTTGTCTCCGCAAGAGGTGGCATTTTTGGCCACTGGTTCTTTCATGGAGCGACTATTATTTTCTATGATGAGATGGGAACAAAATGTCTTTGACGAAGTTGGAGACTTTTTTACAGAATACATTGTAGATGATCCTGAATGTAATTTCCTCGAAAAAGGTAAAGTGAGAGCTGTTACAAGAATGTTATTGCTACCATCCAGATCTGAGACCAAGTTTCTTCAAAAAAGGTTTGCAACCGGGCCCTCCCATGCCCCTTTTGAGGGCTTGGTAGTCTCGCATCAGGATAGGCTTTTATCTAACGCAAGGCTTCTTCACTCAGCATACACATACATCCCACCAACAAGAGCTCCCCCTATTGATGCTCATTGCTCTGATAGAAACTTCTCCTACAAAAAGATTGAAGAATTACATGATCCTTGGGTTAAGAGGTTTTTTGTTGGATTTGCACGTACATCTGAATGTAATGGGCCTAGAAAGCCCAATCCCCATCATCCTCATTATTTAATTCAAGAGATCGATTCTGAATTACCTGTTTCACAGCCTGCGCTGCAGTTAACTCACAGTATTTTTGGCTCCACACCACCTATGCGGAATTTTGACCCAGCAAAGTTGCTCACTGACTCTGGGAAACTTCAAACTCTTGATATATTACTGAAACGCTTACGCGCAGGAAATCATCGTATTCTTTTGTTTGCTCAGATGACTAAGATGCTGAATATTTTGGAGGACTATATGAACTACAGAAAATACAAGTATTTTAGACTTGATGGGTCATCTACAATTCAGGATCGCAGAGACATGGTCAAAGACTTCCAACAAAGGAGTGATATTTTTGTGTTCTTGCTGAGTACAAGAGCTGGTGGATTGGGTATCAACTTGACAGCTGCTGACACGGTCATATTTTATGAGAGTGATTGGAATCCGACATTGGATCTTCAAGCAATGGATAGAGCTCATCGTTTGGGTCAGACGAGAGATGTTACAGTTTATCGACTTATATGTAAAGAGACTGTTGAAGAGAAGATTCTTCTTAGAGCAAGTCAAAAAAGTACCGTACAGAACCTTGTCATGACTGGTGGTTCTGTTGGCGGTGATCTTTTAGCTCCCGAGGATGTTGTATCTTTGCTTTTGGATGATGTCCAATTGCAACAAAAATTTAAGGAAATCCCTCTCCAGGTAAAGGATAGGCAAAAGAGAAAACAATCTATGAAGGGCATTCGAGTAAGCGAAGATGGTGATGCATCTCTGGAAGATTTGACAAACTCTGTAGCTCAGAGTATTGAAGATAATGATGCTTTTGTGGATCCCGAGGGGATAAAGTCCAGTAATAAAAAGAGAAAAGCAACTTCAGACAAGCAAACTTCAAGATCAAAGAATTCTAAAAAGATGGGTGAACTTGGCAATATGCCTATAGATGAAACGGATGATGCCCATCTAAATAATGATTCAGCGGGCCAGAAACCAAAGAGACCAAAGACAAAGAAGAATATAAATGAAAAGCTTGAAGAAGTTTATACTGGGACAGCCACCATTTTACCAGAGCAGACCCAATATGATTTCAGTTTTGGAGGTTCTAAAGCAGAGACAATTCAAGACTTATGA | 4509 | 0.4074 | MDYTNNSNHSLSYSTLFNLQSLVNFQLPQQDDEFDYYGNSSQDEEESRDSRRGGGGAIGNHSNGNVHSKDVNLSKNKRVRSQNSDDEDRGSFYGAYMTEEKYRSMLGDHVQKYKRRSKDIASSHAQNRGAVPLVKSNNNGLKAQKLGNDNRGGLHAAETLSEWLYNSNSQKQENYHNADLVQRRNGADRVMYEPSILEIGDGITYKILPIYDKLATTLNLPSFSDIHVDEFYLKGTLDLGSLAAMMAADKRLGNKIRAGMGEPLFQYQSLQERIKAMSASNSPQKFSLNVSDIGLNSSIPEGAAGNIKRSILSEGGVLQVYYVKVLEKGDTYEIIERSLPKKQKVKKDPASIEKEEMDRIGKIWVRLKISRSLKWNRSASIRTRKLSRDMLLFWKRIDKEMAEVRKREEKEAAEALRREQELREAKRQQQRLNFLIQQTEIYSHFMQNKSDLLSSEALPVAEEKTNDQDAPFISSDAGPNEEEDPEEAELKKEALKAAQEAVFKQKKLTNAFDSECLRLRQVGEADPLMQEVAGASNIDLQTPSTMPVASTVQTPELFKGCLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPELKRLPYWGGLSERTVLRKSINPKDLYRREAKFHVLITSYQLLVSDEKYFRRVKWQYMVLDEAQAIKSANSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVVSELTQKTEVMVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFYFGEIPNSLPPPPFGELEDVYYAGGLNPLSFQIPKLVYQDIMQSSETLSSAVGRGVSRETFQKHFNIFQPENVHRSIFSEETNVESGNFGFTHLMDLSPQEVAFLATGSFMERLLFSMMRWEQNVFDEVGDFFTEYIVDDPECNFLEKGKVRAVTRMLLLPSRSETKFLQKRFATGPSHAPFEGLVVSHQDRLLSNARLLHSAYTYIPPTRAPPIDAHCSDRNFSYKKIEELHDPWVKRFFVGFARTSECNGPRKPNPHHPHYLIQEIDSELPVSQPALQLTHSIFGSTPPMRNFDPAKLLTDSGKLQTLDILLKRLRAGNHRILLFAQMTKMLNILEDYMNYRKYKYFRLDGSSTIQDRRDMVKDFQQRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTRDVTVYRLICKETVEEKILLRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDVQLQQKFKEIPLQVKDRQKRKQSMKGIRVSEDGDASLEDLTNSVAQSIEDNDAFVDPEGIKSSNKKRKATSDKQTSRSKNSKKMGELGNMPIDETDDAHLNNDSAGQKPKRPKTKKNINEKLEEVYTGTATILPEQTQYDFSFGGSKAETIQDL | 1502 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre2g01977 | 1502 | Pfam | DNA-binding domain | 333 | 450 | IPR020838 | GO:0003677 | |
| Trre2g01977 | 1502 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1182 | 1366 | IPR001650 | - | |
| Trre2g01977 | 1502 | MobiDBLite | consensus disorder prediction | 1437 | 1458 | - | - | |
| Trre2g01977 | 1502 | Gene3D | - | 557 | 799 | IPR038718 | - | |
| Trre2g01977 | 1502 | CDD | SF2_C_SNF | 1170 | 1302 | - | - | |
| Trre2g01977 | 1502 | MobiDBLite | consensus disorder prediction | 1402 | 1428 | - | - | |
| Trre2g01977 | 1502 | PANTHER | HELICASE SRCAP-RELATED | 368 | 505 | - | - | |
| Trre2g01977 | 1502 | Gene3D | - | 800 | 869 | IPR027417 | - | |
| Trre2g01977 | 1502 | MobiDBLite | consensus disorder prediction | 71 | 87 | - | - | |
| Trre2g01977 | 1502 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 792 | 1361 | IPR027417 | - |
Showing 1 to 10 of 27 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre2g01977 | K11665 | - | gmx:100780615 | 2328.13 |
Showing 1 to 1 of 1 entries