Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01922 ATGGCAAAGAGCAAGAGCTGGTTTGGATGGGTGAAAAGCCTTTTCATTTCTGAGTTAAAGGACAAAAAGCAAAGGAAATGGGCATGGAGATTAGGAAGGATTAAACAGAAGCAATACCCTTCAATTACAGCTTCAAATAAGACATTAATTGAAGAAGCAAGTGCAGAGCAAAGAAAACATGCTTTAGCTGTGGCTATTGCAACAGCTTCTGCTGCAGAGGCTGCAATTGCTGCTGCACATGCTGCTGCTGAGGTTGTCAAGCTCACAGATGGCACGTCTCGTTCGTATTCATATCTCTCGAAGGGAGACAGAAGTTTTGCTGCCATTAAGATTCAAAGCGCTTACCGCGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATCAGACTACAGGCCATAATTCGCGGAGAAGCAGTTAGGCGTCAAGTGTCGAGAACATCAAAGAATGTTCCCTCTTATGCAAAAAATCGGAAGGAAATCCAGGAAAGAAGCAGCCATACTGACGAAGAAAACTACAAACATTACCATGTAAAACAGTTTCCAAAGCAAAAGAAAAGCACAGAAGAGAATGAACTTAAGCTTGAATGTGATAGTCAGAGAACGTGGAATTATAGCTCTTACTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAGCAAGAAGCTATTTTTAAAAGAGACAGGATGAGGCAATACTCTTCTTCACAAAAGGAGAGAAGATTTTCCCAAAGGGTGGAAGAATCTCTGCAGGACAAAGAATTTGGAGGAGATAGTTGTCATACTCTTGGAGAGTGGCTACAAAAAGAAACATGTAACTGGAATGATCCTTCAAATATCACAATAAGAAATGAAGTGCAAGAAGGATTAAGATCACAAATTTCAGTCCAAAGAAAATCATTTTCTCATGTGAAAAAAAGTTCATTTGGAGATGAGTGTTCCATGCCAAATTCTCCAGTTTTTCCTAAATACATGGCTGTCACTGAATCTAGTAAAGCAAAAGTAAGGTCTATGAGCACACCAAGGCTAAGAACATGA 1044 0.3985 MAKSKSWFGWVKSLFISELKDKKQRKWAWRLGRIKQKQYPSITASNKTLIEEASAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTDGTSRSYSYLSKGDRSFAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGEAVRRQVSRTSKNVPSYAKNRKEIQERSSHTDEENYKHYHVKQFPKQKKSTEENELKLECDSQRTWNYSSYSREDIEAIWLRKQEAIFKRDRMRQYSSSQKERRFSQRVEESLQDKEFGGDSCHTLGEWLQKETCNWNDPSNITIRNEVQEGLRSQISVQRKSFSHVKKSSFGDECSMPNSPVFPKYMAVTESSKAKVRSMSTPRLRT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01922 347 Gene3D - 103 153 - -
Trre2g01922 347 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Trre2g01922 347 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Trre2g01922 347 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Trre2g01922 347 MobiDBLite consensus disorder prediction 148 191 - -
Trre2g01922 347 PANTHER IQ-DOMAIN 5-RELATED 4 344 - -
Trre2g01922 347 MobiDBLite consensus disorder prediction 158 191 - -
Trre2g01922 347 Pfam Protein of unknown function (DUF4005) 318 346 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01922 Trre-Chr2 15684045 15686190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01922 1 347 IQD Protein Family AT5G03960 41.867 8.92e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01922 - - gmx:100800767 408.683