Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01866 ATGAAGAACTCTGCTTCGGATCATGGTTTGTTCATCGAGAGCGATGACGATGAAGAGAAGGATTTAGGAAGAGATGAGAATGATGGAAATGAATCAGACTTTTCAAATGACTCTCATGATAATTTAGACCAAAGAAAGCCAAGTTCCTACAGCATGGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTGTATGGTAGCGTGCCATCGCCAAATATCGGATTTCTTGGCACAACATCACTGACAAGATTAGGCAGTTCTTTTCTTGGTTCGACATTGACAAGGAGGCACACTGCTGAAATTATACCGCCTATCAAAAAGCCTCTGATACAACCGACAGTGGACGAAGAGCAGCAGCAGGATAGCTCTCAGACATTTCTTCCTCCCCTCCCATCTAGGAAGTCTTCAATTAGGAAATCTTCAAAGATTTCTCATGAAGTTCATATTCCTGGCCAATGCTCTTTCGGACAAGCTGTGCTTAACGGTATGAATGCCCTTTGTGGTGTTGGAATCCTTTCAACCCCTTATGCTCTTAATGAAGGTGGATGGGCTGCACTTGGAATCTTGCTGCTATTTGCAGCATTTTCCTTTTATACTGGATTGCTGTTGCGGTATTGCTTAGATAGCGAACCTGGTCTGGAAACTTATCCCGACATTGGTCAAGCAGCTTTTGGTACTCTTGGACGTGTCGTCATTTCTATAATATTATACATGGAATTATATGCTTGCTGCATTGAATACATCATTCTAGAGAGCGACAATCTATCGTCCTTATTTCCGGATGCAAGCTTAACTTTGGGTGGATTTAAATTGAATGCGCACATTCTATTTGCAATCTTGGCCACATTGGCTATTCTTCCCACCGTTTGGCTCCGGGATCTTCGCATTCTAAGTTACATATCAGGATGCGGAGTCATTGCAACGGCTGTTGTGGTTCTGTGTTTGGTGTGGGTTGGCGTGGTAGACGATACTCCGCTTAGTACAAAAGGAACAACAACACTTAAACTTTCAACATTCCCTGTTGCTATGGGTCTATGCGGTTACTGCTTCTCCGGACATGCTGTGTTCCCCAACTTATATACCGCTATGGCTAATCGAAATCAATTCCCTGCAGTACTCTTGACATGTTTTGCAATTTGCACATCAATGTATTGTTTTGTAGCTGTTTTGGGATACTTAATGTTTGGAGAAGATACAAAATCTCAATATACTCTTAACATGCCTCGAGAATATATAGCCTACAACATCGCTGTGTGGACTACGGTCGTTAATCCGCTTACCAAATATCCTTTATAA 1296 0.4228 MKNSASDHGLFIESDDDEEKDLGRDENDGNESDFSNDSHDNLDQRKPSSYSMAWPQSYRQSIDLYGSVPSPNIGFLGTTSLTRLGSSFLGSTLTRRHTAEIIPPIKKPLIQPTVDEEQQQDSSQTFLPPLPSRKSSIRKSSKISHEVHIPGQCSFGQAVLNGMNALCGVGILSTPYALNEGGWAALGILLLFAAFSFYTGLLLRYCLDSEPGLETYPDIGQAAFGTLGRVVISIILYMELYACCIEYIILESDNLSSLFPDASLTLGGFKLNAHILFAILATLAILPTVWLRDLRILSYISGCGVIATAVVVLCLVWVGVVDDTPLSTKGTTTLKLSTFPVAMGLCGYCFSGHAVFPNLYTAMANRNQFPAVLLTCFAICTSMYCFVAVLGYLMFGEDTKSQYTLNMPREYIAYNIAVWTTVVNPLTKYPL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01866 431 Pfam Transmembrane amino acid transporter protein 153 431 IPR013057 -
Trre2g01866 431 PANTHER OS05G0424000 PROTEIN-RELATED 161 423 - -
Trre2g01866 431 MobiDBLite consensus disorder prediction 113 135 - -
Trre2g01866 431 MobiDBLite consensus disorder prediction 1 49 - -
Trre2g01866 431 MobiDBLite consensus disorder prediction 25 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01866 Trre-Chr2 15293027 15296090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01866 1 431 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.242 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01866 K15015 - gmx:100781123 608.986