Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01864 ATGAAAAATAGATGTTGTTCCTTAATCAGAAGTACATATGCTTTGAGTCTAACACCAGTAGCAATGTCTGTGGAGGAATTGATACCACCAACTAATTCCAAATTTAAATTATACTCCATCCTCATAAGAACAGCACTTGTGATTTCTACACTGCTAGTTGGTCTTTCAGTTCCATTTTTCGGTTTGGTGATGTCGTTAATCGGGTCTTTGCTCACAATGTTTGTGTCCCTTATTCTACCAGCTGCTTGTTTCCTAAGCATCAAGCGCGGAAGAATCACGCGCTCTCAGGTTATACTCTGTGTTACAGTGATCGTAGTAGGTTTAGTTTCATCTGGTTTTGGATCATACTCAGCCATCTCGGAGATTATAGCGAAGCTGTTTCCATGA 387 0.4005 MKNRCCSLIRSTYALSLTPVAMSVEELIPPTNSKFKLYSILIRTALVISTLLVGLSVPFFGLVMSLIGSLLTMFVSLILPAACFLSIKRGRITRSQVILCVTVIVVGLVSSGFGSYSAISEIIAKLFP 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01864 128 PANTHER OS05G0424000 PROTEIN-RELATED 11 110 - -
Trre2g01864 128 Pfam Transmembrane amino acid transporter protein 11 119 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01864 Trre-Chr2 15291838 15292893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01864 11 126 Amino Acid or Auxin Permease AAAP Family AT5G02180 50.862 6.39e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01864 K15015 - gmx:100781123 170.244