Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01862 ATGGAAATTCTAACTTTTGTTGTTGGAAAAGTAGTAGATTATACTGTTGCGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTTAAGATGTTAGCGGATCATGTCAAAGACCTCCAGGCTGCAAAAGAAAGATTGCTTCATTCGGTTGAACAAGAAAGGGGAAATGGTAAAGAAATCGAAAGAGATGTGGTGAACTGGTTGGAGAAAGTGGACGAGCTGATTGAAACAGCAAATCAGCTTCAACAAGATCCTCGTCGTGCCAATGTCAGGTGCTCAACATGGGGGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAAAGCCAAAAAAATTGCAAACGATGTTGTCCAAGTTCAAGGGAAAGGGACGTTTGATCGAGTTGGTTACCTTCCAACCGTAGATGGAGTAGCATCCCCATCCCCAACAAGAGGTAGTGAAATGTATGAGACAAGGGAGTCACTTAAGGAGGAAATTGTGAAGGCTTTATCAAACCCCAATTCACGCAACATTGGGATCTATGGTTTGGGTGGGGTGGGAAAGACCACTCTGGTGGAAGAAGTTATGCTAAAAGCAAAGCAACTTAAATTGTTTGATAAAGTGGTTATAACACATGTATCCCAAAACCCAGACTTTAAAACCATTCAAGGGGAGATTGCAGATTTGTTGGGTTTGCGTTTCGACGAGGAGACAATTTTTGGAAGAGCAAATCGCCTGAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGACAATATATGGAGCATGCTTGATTTGAAGAAAGTGGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGCTGCAAATGGATGTTCCAATGGATTTCACTTTCAAACTTGGACTTATGAGTGAAAACGAGACATGGAAGTTGTTTCAATTTATGGCTGGAGATGTGGTTAAAGATAGAAATTTGAATGATGTAGCAATTCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACGGTGGCACGTGCAATGAGAAATAAGAGAGACATCCAATCCTGGAAAGATGCATTAAGGAAATTACAATGTAATGATCATACAGAGATGGACGCGTTAACTTATTCTGCTTTGGAATTGAGTTACAACTCGTTGGAGAGTGATGAAATGAGGGATATCTTCTTGCTTTTTGCAGTAATGGAAGGTAACAAAGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGAACATATTAAAGCATGTTAATACCATTGATGAGGCAAGAAACAAACTTTACACAATAATCAGATCTTTGGAGGTGACTTGTCTTCTGCTTGATGTTAAAAAAGTTGGGAATATCAGAATGCATGATTTTGTTCGTGATTTTGCTACCTCCATAGCACGTAGGGACAAACATGTACTTCTAAGAAAACAGTTTGATGAAGAATTGCCAACCAATGATTTTTTAAATAGATGCATGCAGATTGTTCTACGATGGTGCCATATCCGTGAGCTTCCTCAAACGATTGGTTGTCCAAACATTAAGTTGTTCTATTTGGCTTGTGAGAACCTATCTTTAAAGATCCCTGATACCTTTTTTGAGGGAATGGCCAGCCTTAGAGTGCTAGATTTAACACATCTGAACTTGTCTTCATTACCCACCTCATTTTGGTTCCTAACCGACCTTAAAACGCTGTGTTTGAATTTCTGCATTTTGGAAAATATGGATGCAATAGAAGGTTTGAAAAATTTACAAATTCTTAGACTCGCATATTCTTCAATGATCAAGTTCCCAAGTGAAATAGGGAAATTGACTCAATTGAGAATGCTTGATTTGAGCAACTCAGGAATTGAAGTACTCCCATCCAACATCATATCAAATTTGATTAACTTGGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGAATTCAACGGTTCAAAATGAAAATGCTAGTATTGCTGAGCTTCAGAATCTACCCAAGTTGACTGCTCTAGAATTACAAATTCGAGAGACTTGGATGTTGCCAAGGGACATGCAATTGATGTTTGAGAAGCTGAATTTTTTTAAAATTGCTATTGGAGATGTATGGGAATGGGAAGACATTGAGGATGAAACCTTAAAAACATTGAAGCTCAAACTTGGTACCAACATACATTTAGAGCACGAAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGGAAGGATTTCCATTGCTGAAACATCTTCACGTCCAAAATAATGCAAACTTGAAGCACATTGTTGACTCTAAAGATAGGAATCAAATTCAGGTGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTCTTTTTGGAAGTCTTAGTGTTATCAAAGTAAAAAATTGTGTCCAATTAAAGTATCTTTTCTCCTATACATTGGTTAAAGAACTTTCCCACCTTTCAGAAATTGAAGTCTTCCACTGCAATTATATGAAGAAGATTGTGCTCAAAGACAACAATTCAAGTGCAAATAATGATATAGATAATGAAAAAATTGATTTTCTTCTATTGCGTTCTTTGACTTTAGAACATTTGGAGACAATGGATGATTTCTTCTCTTATCATTCTCCGAATTCCCGAAGCAAGCAAGAATATCATGGTTTAGAGCCTGATGTTTCTGCCCCATTTTTCAATGCTCAGGTTGCATTTCCTAAATTGGATACCCTCAAATTGAGCTCACTCCTCAATTTGAATAAAATTTGGGATGACAATTATGATTCTATGGACAACTTGACTAGCTTGATTGTGGATAATTGTGGCGGGTTGAAGTACTTATTCTCATCTACTGTGGTTGAAAGTTTTAAGAACCTAAAACACCTTGAAATAAGTAATTGTGCTATGATGGAGGAGATTATAGCTAAAGAAGAGGGAAGAGGTGCATCAGAGGAAGAGTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCACCAATTTGAAACATTGAAGAAGTTGCAAGTGAACAGCTGTAATAACATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAAACATATAATAAGCTAGAGATGTTAGAGGTTACAAATTGTGGTTTAGTGGAAGAAATATTTGAATTGAGCTTCAATGGAAGTAGCAGTGTAGAAGATACAACACATTTGACAGAAGTTACTATAGATGGATTGCCAAAGCTGAAAAAGATATGGAGTAGGGATCCTCATGGAATTCTTAGTTTTCAAAATCTAATAAATGTAAAAGTAGAAAGTTGTGAAGGTTTGGAGTATCTATTACCACTTTCCGTAGCCACTCATTGCTCACATCTCAAGGAACTTGATATAAAATATTGTGGAAACATGAAGGAAATTGTTGCAGAGGAAAAAGAATCTAGCAGCGTGAATGCAACTCCCATTTTTGAGTTTAATCAACTCAGTACTTTACTGCTTTGGAGCTTAATTAGACTCAAGGTTTTCTTTGCTAAAAAGCATACCCTAGCATGTCCATCTTTGAAGATAATTGATGTTTTCAATTGTCCAACGTTGACTTTGTTTAGAACTCTATCTACAAGAAGATCCAATATTGGAGATGACAAACACTCTGTTTCAACACAACAACCACTTTTCATTGTGGAAGAGGTGATTCCAAATTTAGAGATGTTGAGAATAAATCATAAGGATGCTAACATGATACTGCAAGCCCAAAACTCAAGTGGCCTATTGACAAAATTGAAATCTCTTGGTTTGTATGGTTATAAGTATGAAGATACATTTCCCTATTGGTTTCTTCAAAATGTGCGTGGTCTTGAAACACTACTTATTGAAGAGAGTTGCTTCAAGAAGATATTTCAAGATGAAGGAAGAATGGGTGAGAAGACTCACACACAGATCAAAGAGTTGACATTGAATGATTTACCTAACCTTGAACATATATGTGAGGAAGGATTTCGAATTGACCCAGTTCTTGAGTTCCTTGAATACTTATGGGTTTCAGATTGTTCCAGTCTAACAAATTTGCTGCCTTCCTCAGCCACCTTTACTCATTTGGTATATTTAGAGATAAAAGATTGCAATGGGCTAACAAAATTAATTACATCTTCTACCGCACAAAGTTTGATCAACCTCACAATACTAAAGATAAAAGACTGTAATTCACTTGAAGAAATAATTCTTGGAGAGGAAAATGTTCCCATTACATTTATTAGTTTACAAATATTGATGTTGGAATGTTTGCCCAACCTCAACCAATTTTGCTCTACTAAGTGCTTCGTCAAATTTCCATTGTTGGAATTAGTAATTGTGAGAGAATGTCCTCGCATGAAGGTTTTTTCTGAAGGATACATAAGTACACCAAATCTTCGAAAAGTGAAAATTGCAGAAAATGATGAAGAATGGTTTTGGAAGGGAAACCTAAATGATACAATAAAAACCATGTTTGAAGATAAGGTTGCATTTGGAAAATTCAAATATTTGGCCTTATCCGACTACCCTGAGATGAAGGATTTGTGGTATGGTCAACTTGATCATCAAAATGTATTTTGCAATTTGAAACATCTAGTGGTGCATAGATGTGATTTTTTATCACATGTAGTTTTTCCGTCAAATGTAATGCAAGTGCTATATGGATTGGAAGAACTAGAAGTAACAGATTGTGATTCATTAGAAGCAGTGTTTGATGTGAAAGGTATGAAGTCTGCACAAGAAATATTGATAAATCAAAGCACTCAATTGAAAAAATTGACTTTGTCTGAGTTACCAAAATTGAAGCACATATGGAATGAGGATCCTGATGATATTATAAACTTTGGAAAATTATGCACGCTGAATGTTTCTAAGTGTCAAAGTTTGTTATATATATTTCCATTGTCATTGTGTGAAGATCTTGGACATCTTGAAATGCTTGAGATAGAGTATTGTGGAGTTGAGCAAATTGTAGCAATGGAAGAAGGATCAATGGAACATAGCTTTAATTTTCCTCAATTGAATAAGTTGAAACTGGTTTATTTGGAAAAACTTACGAGCTTCTACTGTGGAAAACATTCTTTAGATTGCCCTTCATTAAAGGTATTGGATGTACATGGTTGTGCCCTCAACCATTTGGACTGGTTCTCTATTGAAAAGTTGAACCCTAACATGGAGGAATTGGCAATAAATGGCACAGATGTGTTGGGGATATTGAATCAAGGAAAAAATATCTTTCACAAAGTTGAATTTCTTCGTTTACAATACTTGGATGAAACTCCAACTATTTTTCTGAATGAATATTTTCACACAATTTTTCCTAATCTTGAAAGATTTGAAGTGCGTTATGGTTCGTTTAAAGCATTGTTCCCCACTACTGGTTACCTCGGTATGCAAATTTCAAAGCAAATAAAAATTTTGATGCTTTTTAAATTGGAAATGCTCAAGCACATCTGGCAAGAAGACTTTCCATTGGACCATCCTTTGTTACAAGATCTTCATGAATTATATGTATGGGATTGTCCAAGTTTGATAAGCTTGGTACCATCGTCGACATCTTTCACAAATTTAACGAGTTTGGTAGTAGAAAATTGCAAAGAGCTGAATTATTTGATAACATCTGCAACAGCTAAAAGCTTAATTCAACTCAAAAGATTAGAAATATCAAATTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGATGAAAAAGCAGAGGAAGACATCATATTTCAAAACTTGGAATACATGGAATTCACTTCTATGTCAAGTTTGGGAAGCTTCTGCAATGGGAATCAAACATTCATATTCCCATCTTTGCTAACTCTCATTGTTAAAGAATGCCCTCAAATGGAGATCTTCTCATCAGGAGTCACAGTAGCACCATGTCTGTCAGAAATTGAAGTGGGAGAAGAAACAATTCGATGGAAAGGTGACATTAACACAACTATTCAACATTTATTCCAAGAAAAGGAAGTCCTACGTTCTAATTCGGTGAATGAGACCATAATATCTTCACATTTGCAAGATGATGAGCTAGGAGGTCAAGATGGTATTGAAGCAAACCCCGAGGAGTGA 6174 0.3601 MEILTFVVGKVVDYTVAPIGRQASYLIFYKGNFKMLADHVKDLQAAKERLLHSVEQERGNGKEIERDVVNWLEKVDELIETANQLQQDPRRANVRCSTWGFPNLILRHQLSRKAKKIANDVVQVQGKGTFDRVGYLPTVDGVASPSPTRGSEMYETRESLKEEIVKALSNPNSRNIGIYGLGGVGKTTLVEEVMLKAKQLKLFDKVVITHVSQNPDFKTIQGEIADLLGLRFDEETIFGRANRLRQRIKMEKSILVILDNIWSMLDLKKVGIPIGNEHNGCKLLMTSRNQDVLLQMDVPMDFTFKLGLMSENETWKLFQFMAGDVVKDRNLNDVAIQVAQKCEGLPLRVVTVARAMRNKRDIQSWKDALRKLQCNDHTEMDALTYSALELSYNSLESDEMRDIFLLFAVMEGNKVEYFLKVAMGLNILKHVNTIDEARNKLYTIIRSLEVTCLLLDVKKVGNIRMHDFVRDFATSIARRDKHVLLRKQFDEELPTNDFLNRCMQIVLRWCHIRELPQTIGCPNIKLFYLACENLSLKIPDTFFEGMASLRVLDLTHLNLSSLPTSFWFLTDLKTLCLNFCILENMDAIEGLKNLQILRLAYSSMIKFPSEIGKLTQLRMLDLSNSGIEVLPSNIISNLINLEELYMGNTSINWEDVNSTVQNENASIAELQNLPKLTALELQIRETWMLPRDMQLMFEKLNFFKIAIGDVWEWEDIEDETLKTLKLKLGTNIHLEHEIKALIKGVENLYLDDVDGIQNVLYQLNGEGFPLLKHLHVQNNANLKHIVDSKDRNQIQVSFPILETLVLHNLKNLEHICHGPLSITLFGSLSVIKVKNCVQLKYLFSYTLVKELSHLSEIEVFHCNYMKKIVLKDNNSSANNDIDNEKIDFLLLRSLTLEHLETMDDFFSYHSPNSRSKQEYHGLEPDVSAPFFNAQVAFPKLDTLKLSSLLNLNKIWDDNYDSMDNLTSLIVDNCGGLKYLFSSTVVESFKNLKHLEISNCAMMEEIIAKEEGRGASEEEFCKLEKIILKDMDNLKTIWHHQFETLKKLQVNSCNNIVVVFPSSMQKTYNKLEMLEVTNCGLVEEIFELSFNGSSSVEDTTHLTEVTIDGLPKLKKIWSRDPHGILSFQNLINVKVESCEGLEYLLPLSVATHCSHLKELDIKYCGNMKEIVAEEKESSSVNATPIFEFNQLSTLLLWSLIRLKVFFAKKHTLACPSLKIIDVFNCPTLTLFRTLSTRRSNIGDDKHSVSTQQPLFIVEEVIPNLEMLRINHKDANMILQAQNSSGLLTKLKSLGLYGYKYEDTFPYWFLQNVRGLETLLIEESCFKKIFQDEGRMGEKTHTQIKELTLNDLPNLEHICEEGFRIDPVLEFLEYLWVSDCSSLTNLLPSSATFTHLVYLEIKDCNGLTKLITSSTAQSLINLTILKIKDCNSLEEIILGEENVPITFISLQILMLECLPNLNQFCSTKCFVKFPLLELVIVRECPRMKVFSEGYISTPNLRKVKIAENDEEWFWKGNLNDTIKTMFEDKVAFGKFKYLALSDYPEMKDLWYGQLDHQNVFCNLKHLVVHRCDFLSHVVFPSNVMQVLYGLEELEVTDCDSLEAVFDVKGMKSAQEILINQSTQLKKLTLSELPKLKHIWNEDPDDIINFGKLCTLNVSKCQSLLYIFPLSLCEDLGHLEMLEIEYCGVEQIVAMEEGSMEHSFNFPQLNKLKLVYLEKLTSFYCGKHSLDCPSLKVLDVHGCALNHLDWFSIEKLNPNMEELAINGTDVLGILNQGKNIFHKVEFLRLQYLDETPTIFLNEYFHTIFPNLERFEVRYGSFKALFPTTGYLGMQISKQIKILMLFKLEMLKHIWQEDFPLDHPLLQDLHELYVWDCPSLISLVPSSTSFTNLTSLVVENCKELNYLITSATAKSLIQLKRLEISNCEKMLDVVKIDDEKAEEDIIFQNLEYMEFTSMSSLGSFCNGNQTFIFPSLLTLIVKECPQMEIFSSGVTVAPCLSEIEVGEETIRWKGDINTTIQHLFQEKEVLRSNSVNETIISSHLQDDELGGQDGIEANPEE 2057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01862 2057 SMART LRR_typ_2 614 637 IPR003591 -
Trre2g01862 2057 SMART LRR_typ_2 546 569 IPR003591 -
Trre2g01862 2057 Gene3D - 142 301 IPR027417 -
Trre2g01862 2057 SUPERFAMILY L domain-like 930 1228 - -
Trre2g01862 2057 SUPERFAMILY L domain-like 1548 1987 - -
Trre2g01862 2057 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1281 1499 - -
Trre2g01862 2057 SMART AAA_5 172 308 IPR003593 GO:0016887
Trre2g01862 2057 SUPERFAMILY L domain-like 464 882 - -
Trre2g01862 2057 Coils Coil 68 88 - -
Trre2g01862 2057 SUPERFAMILY RNI-like 1366 1623 - -
Trre2g01862 2057 Coils Coil 40 60 - -
Trre2g01862 2057 PRINTS Disease resistance protein signature 342 356 - -
Trre2g01862 2057 PRINTS Disease resistance protein signature 248 262 - -
Trre2g01862 2057 PRINTS Disease resistance protein signature 175 190 - -
Trre2g01862 2057 PRINTS Disease resistance protein signature 986 1002 - -
Trre2g01862 2057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 406 IPR027417 -
Trre2g01862 2057 Gene3D Ribonuclease Inhibitor 929 1236 IPR032675 -
Trre2g01862 2057 Gene3D Ribonuclease Inhibitor 1494 1698 IPR032675 -
Trre2g01862 2057 Gene3D Ribonuclease Inhibitor 1237 1434 IPR032675 -
Trre2g01862 2057 Pfam NB-ARC domain 158 393 IPR002182 GO:0043531
Trre2g01862 2057 SUPERFAMILY RNI-like 1113 1384 - -
Trre2g01862 2057 Gene3D - 308 396 IPR042197 -
Trre2g01862 2057 Gene3D Ribonuclease Inhibitor 500 908 IPR032675 -
Trre2g01862 2057 Gene3D Ribonuclease Inhibitor 1728 2032 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01862 Trre-Chr2 15270875 15282898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01862 174 625 WRKY Transcription Factor Family AT5G45050 24.536 2.46e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01862 - - tpra:123924644 2604.32