Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01861 ATGGAAATTCTAACTTTTGTTGTTGGAAAAGTAGTAGATTATACTGTTGCGCCTATTGGACGTCAAGCAAGTTACTTGATATTCTACAAAGGCAATTTTAAGATGTTAGCGGATCATGTCAAAGACCTCCAGGCTGCAAAAGAAAGATTGCTTCATTCGGTTGAACAAGAAAGGGGAAATGGTAAAGAAATCGAAAGAGATGTGGTGAACTGGTTGGAGAAAGTGGACGAGCTGATTGAAACAGCAAATCAGCTTCAACAAGATCCTCGTCGTGCCAATGTCAGGTGCTCAACATGGGGGTTCCCCAATTTGATTTTGCGTCATCAACTAAGTAGGAAAGCCAAAAAAATTGCAAACGATGTTGTCCAAGTTCAAGGGAAAGGGACGTTTGATCGAGTTGGTTACCTTCCAACCGTAGATGGAGTAGCATCCCCATCCCCAACAAGAGGTAGTGAAATGTATGAGACAAGGGAGTCACTTAAGGAGGAAATTGTGAAGGCTTTATCAAACCCCAATTCACGCAACATTGGGATCTATGGTTTGGGTGGGGTGGGAAAGACCACTCTGGTGGAAGAAGTTATGCTAAAAGCAAAGCAACTTAAATTGTTTGATAAAGTGGTTATAACACATGTATCCCAAAACCCAGACTTTAAAACCATTCAAGGGGAGATTGCAGATTTGTTGGGTTTGCGTTTCGACGAGGAGACAATTTTTGGAAGAGCAAATCGCCTGAGACAAAGAATCAAGATGGAGAAAAGTATCCTTGTCATTCTAGACAATATATGGAGCATGCTTGATTTGAAGAAAGTGGGAATCCCAATTGGTAATGAACATAATGGTTGCAAATTATTGATGACAAGTAGAAATCAAGATGTGTTGCTGCAAATGGATGTTCCAATGGATTTCACTTTCAAACTTGGACTTATGAGTGAAAACGAGACATGGAAGTTGTTTCAATTTATGGCTGGAGATGTGGTTAAAGATAGAAATTTGAATGATGTAGCAATTCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACGGTGGCACGTGCAATGAGAAATAAGAGAGACATCCAATCCTGGAAAGATGCATTAAGGAAATTACAATGTAATGATCATACAGAGATGGACGCGTTAACTTATTCTGCTTTGGAATTGAGTTACAACTCGTTGGAGAGTGATGAAATGAGGGATATCTTCTTGCTTTTTGCAGTAATGGAAGGTAACAAAGTAGAGTACTTTCTGAAAGTTGCAATGGGTTTGAACATATTAAAGCATGTTAATACCATTGATGAGGCAAGAAACAAACTTTACACAATAATCAGATCTTTGGAGGTGACTTGTCTTCTGCTTGATGTTAAAAAAGTTGGGAATATCAGAATGCATGATTTTGTTCGTGATTTTGCTACCTCCATAGCACGTAGGGACAAACATGTACTTCTAAGAAAACAGTTTGATGAAGAATTGCCAACCAATGATTTTTTAAATAGATGCATGCAGATTGTTCTACGATGGTGCCATATCCGTGAGCTTCCTCAAACGATTGGTTGTCCAAACATTAAGTTGTTCTATTTGGCTTGTGAGAACCTATCTTTAAAGATCCCTGATACCTTTTTTGAGGGAATGGCCAGCCTTAGAGTGCTAGATTTAACACATCTGAACTTGTCTTCATTACCCACCTCATTTTGGTTCCTAACCGACCTTAAAACGCTGTGTTTGAATTTCTGCATTTTGGAAAATATGGATGCAATAGAAGGTTTGAAAAATTTACAAATTCTTAGACTCGCATATTCTTCAATGATCAAGTTCCCAAGTGAAATAGGGAAATTGACTCAATTGAGAATGCTTGATTTGAGCAACTCAGGAATTGAAGTACTCCCATCCAACATCATATCAAATTTGATTAACTTGGAGGAGTTGTACATGGGCAATACCTCTATTAATTGGGAAGATGTGAATTCAACGGTTCAAAATGAAAATGCTAGTATTGCTGAGCTTCAGAATCTACCCAAGTTGACTGCTCTAGAATTACAAATTCGAGAGACTTGGATGTTGCCAAGGGACATGCAATTGATGTTTGAGAAGCTGAATTTTTTTAAAATTGCTATTGGAGATGTATGGGAATGGGAAGACATTGAGGATGAAACCTTAAAAACATTGAAGCTCAAACTTGGTACCAACATACATTTAGAGCACGAAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTACTTGGATGATGTTGATGGAATTCAAAATGTGCTTTATCAACTAAATGGGGAAGGATTTCCATTGCTGAAACATCTTCACGTCCAAAATAATGCAAACTTGAAGCACATTGTTGACTCTAAAGATAGGAATCAAATTCAGGTGTCCTTTCCCATCTTGGAAACACTAGTACTTCACAATCTTAAAAACTTGGAGCATATATGTCATGGTCCACTTTCAATTACTCTTTTTGGAAGTCTTAGTGTTATCAAAGTAAAAAATTGTGTCCAATTAAAGTATCTTTTCTCCTATACATTGGTTAAAGAACTTTCCCACCTTTCAGAAATTGAAGTCTTCCACTGCAATTATATGAAGAAGATTGTGCTCAAAGACAACAATTCAAGTGCAAATAATGATATAGATAATGAAAAAATTGATTTTCTTCTATTGCGTTCTTTGACTTTAGAACATTTGGAGACAATGGATGATTTCTTCTCTTATCATTCTCCGAATTCCCGAAGCAAGCAAGAATATCATGGTTTAGAGCCTGATGTTTCTGCCCCATTTTTCAATGCTCAGGTTGCATTTCCTAAATTGGATACCCTCAAATTGAGCTCACTCCTCAATTTGAATAAAATTTGGGATGACAATTATGATTCTATGGACAACTTGACTAGCTTGATTGTGGATAATTGTGGCGGGTTGAAGTACTTATTCTCATCTACTGTGGTTGAAAGTTTTAAGAACCTAAAACACCTTGAAATAAGTAATTGTGCTATGATGGAGGAGATTATAGCTAAAGAAGAGGGAAGAGGTGCATCAGAGGAAGAGGTTCAGTTTTGCAAATTAGAGAAAATCATATTGAAGGACATGGACAACTTGAAGACAATATGGCACCACCAATTTGAAACATTGAAGAAGTTGCAAGTGAACAGCTGTAATAACATTGTGGTGGTTTTTCCCTCTTCAATGCAAAAAACATATAATAAGCTAGAGATGTTAGAGGTTACAAATTGTGGTTTAGTGGAAGAAATATTTGAATTGAGCTTCAATGGAAGTAGCAGTGTAGAAGATACAACACATTTGACAGAAGTTACTATAGATGGATTGCCAAAGCTGAAAAAGATATGGAGTAGGGATCCTCATGGAATTCTTAGTTTTCAAAATCTAATAAATGTAAAAGTAGAAAGTTGTGAAGGTTTGGAGTATCTATTACCACTTTCCGTAGCCACTCATTGCTCACATCTCAAGGAACTTGATATAAAATATTGTGGAAACATGAAGGAAATTGTTGCAGAGGAAAAAGAATCTAGCAGCGTGAATGCAACTCCCATTTTTGAGTTTAATCAACTCAGTACTTTACTGCTTTGGAGCTTAATTAGACTCAAGGTTTTCTTTGCTAAAAAGCATACCCTAGCATGTCCATCTTTGAAGATAATTGATGTTTTCAATTGTCCAACGTTGACTTTGTTTAGAACTCTATCTACAAGAAGATCCAATATTGGAGATGACAAACACTCTGTTTCAACACAACAACCACTTTTCATTGTGGAAGAGGTGATTCCAAATTTAGAGATGTTGAGAATAAATCATAAGGATGCTAACATGATACTGCAAGCCCAAAACTCAAGTGGCCTATTGACAAAATTGAAATCTCTTGGTTTGTATGGTTATAAGTATGAAGATACATTTCCCTATTGGTTTCTTCAAAATGTGCGTGGTCTTGAAACACTACTTATTGAAGAGAGTTGCTTCAAGAAGATATTTCAAGATGAAGGAAGAATGGGTGAGAAGACTCACACACAGATCAAAGAGTTGACATTGAATGATTTACCTAACCTTGAACATATATGTGAGGAAGGATTTCGAATTGACCCAGTTCTTGAGTTCCTTGAATACTTATGGGTTTCAGATTGTTCCAGTCTAACAAATTTGCTGCCTTCCTCAGCCACCTTTACTCATTTGGTATATTTAGAGATAAAAGATTGCAATGGGCTAACAAAATTAATTACATCTTCTACCGCACAAAGTTTGATCAACCTCACAATACTAAAGATAAAAGACTGTAATTCACTTGAAGAAATAATTCTTGGAGAGGAAAATGTTCCCATTACATTTATTAGTTTACAAATATTGATGTTGGAATGTTTGCCCAACCTCAACCAATTTTGCTCTACTAAGTGCTTCGTCAAATTTCCATTGTTGGAATTAGTAATTGTGAGAGAATGTCCTCGCATGAAGGTTTTTTCTGAAGGATACATAAGTACACCAAATCTTCGAAAAGTGAAAATTGCAGAAAATGATGAAGAATGGTTTTGGAAGGGAAACCTAAATGATACAATAAAAACCATGTTTGAAGATAAGGTTGCATTTGGAAAATTCAAATATTTGGCCTTATCCGACTACCCTGAGATGAAGGATTTGTGGTATGGTCAACTTGATCATCAAAATGTATTTTGCAATTTGAAACATCTAGTGGTGCATAGATGTGATTTTTTATCACATGTAGTTTTTCCGTCAAATGTAATGCAAGTGCTATATGGATTGGAAGAACTAGAAGTAACAGATTGTGATTCATTAGAAGCAGTGTTTGATGTGAAAGGTATGAAGTCTGCACAAGAAATATTGATAAATCAAAGCACTCAATTGAAAAAATTGACTTTGTCTGAGTTACCAAAATTGAAGCACATATGGAATGAGGATCCTGATGATATTATAAACTTTGGAAAATTATGCACGCTGAATGTTTCTAAGTGTCAAAGTTTGTTATATATATTTCCATTGTCATTGTGTGAAGATCTTGGACATCTTGAAATGCTTGAGATAGAGTATTGTGGAGTTGAGCAAATTGTAGCAATGGAAGAAGGATCAATGGAACATAGCTTTAATTTTCCTCAATTGAATAAGTTGAAACTGGTTTATTTGGAAAAACTTACGAGCTTCTACTGTGGAAAACATTCTTTAGATTGCCCTTCATTAAAGGTATTGGATGTACATGGTTGTGCCCTCAACCATTTGGACTGGTTCTCTATTGAAAAGTTGAACCCTAACATGGAGGAATTGGCAATAAATGGCACAGATGTGTTGGGGATATTGAATCAAGGAAAAAATATCTTTCACAAAGTTGAATTTCTTCGTTTACAATACTTGGATGAAACTCCAACTATTTTTCTGAATGAATATTTTCACACAATTTTTCCTAATCTTGAAAGATTTGAAGTGCGTTATGGTTCGTTTAAAGCATTGTTCCCCACTACTGGTTACCTCGGTATGCAAATTTCAAAGCAAATAAAAATTTTGATGCTTTTTAAATTGGAAATGCTCAAGCACATCTGGCAAGAAGACTTTCCATTGGACCATCCTTTGTTACAAGATCTTCATGAATTATATGTATGGGATTGTCCAAGTTTGATAAGCTTGGTACCATCGTCGACATCTTTCACAAATTTAACGAGTTTGGTAGTAGAAAATTGCAAAGAGCTGAATTATTTGATAACATCTGCAACAGCTAAAAGCTTAATTCAACTCAAAAGATTAGAAATATCAAATTGTGAGAAGATGTTGGATGTTGTGAAGATTGATGATGAAAAAGCAGAGGAAGACATCATATTTCAAAACTTGGAATACATGGAATTCACTTCTATGTCAAGTTTGGGAAGCTTCTGCAATGGGAATCAAACATTCATATTCCCATCTTTGCTAACTCTCATTGTTAAAGAATGCCCTCAAATGGAGATCTTCTCATCAGGAGTCACAGTAGCACCATGTCTGTCAGAAATTGAAGTGGGAGAAGAAACAATTCGATGGAAAGGTGACATTAACACAACTATTCAACATTTATTCCAAGAAAAGGAAGTCCTACGTTCTAATTCGGTGAATGAGACCATAATATCTTCACATTTGCAAGATGATGAGCTAGGAGGTCAAGATGGTATTGAAGCAAACCCCGAGGAGTGA 6180 0.3602 MEILTFVVGKVVDYTVAPIGRQASYLIFYKGNFKMLADHVKDLQAAKERLLHSVEQERGNGKEIERDVVNWLEKVDELIETANQLQQDPRRANVRCSTWGFPNLILRHQLSRKAKKIANDVVQVQGKGTFDRVGYLPTVDGVASPSPTRGSEMYETRESLKEEIVKALSNPNSRNIGIYGLGGVGKTTLVEEVMLKAKQLKLFDKVVITHVSQNPDFKTIQGEIADLLGLRFDEETIFGRANRLRQRIKMEKSILVILDNIWSMLDLKKVGIPIGNEHNGCKLLMTSRNQDVLLQMDVPMDFTFKLGLMSENETWKLFQFMAGDVVKDRNLNDVAIQVAQKCEGLPLRVVTVARAMRNKRDIQSWKDALRKLQCNDHTEMDALTYSALELSYNSLESDEMRDIFLLFAVMEGNKVEYFLKVAMGLNILKHVNTIDEARNKLYTIIRSLEVTCLLLDVKKVGNIRMHDFVRDFATSIARRDKHVLLRKQFDEELPTNDFLNRCMQIVLRWCHIRELPQTIGCPNIKLFYLACENLSLKIPDTFFEGMASLRVLDLTHLNLSSLPTSFWFLTDLKTLCLNFCILENMDAIEGLKNLQILRLAYSSMIKFPSEIGKLTQLRMLDLSNSGIEVLPSNIISNLINLEELYMGNTSINWEDVNSTVQNENASIAELQNLPKLTALELQIRETWMLPRDMQLMFEKLNFFKIAIGDVWEWEDIEDETLKTLKLKLGTNIHLEHEIKALIKGVENLYLDDVDGIQNVLYQLNGEGFPLLKHLHVQNNANLKHIVDSKDRNQIQVSFPILETLVLHNLKNLEHICHGPLSITLFGSLSVIKVKNCVQLKYLFSYTLVKELSHLSEIEVFHCNYMKKIVLKDNNSSANNDIDNEKIDFLLLRSLTLEHLETMDDFFSYHSPNSRSKQEYHGLEPDVSAPFFNAQVAFPKLDTLKLSSLLNLNKIWDDNYDSMDNLTSLIVDNCGGLKYLFSSTVVESFKNLKHLEISNCAMMEEIIAKEEGRGASEEEVQFCKLEKIILKDMDNLKTIWHHQFETLKKLQVNSCNNIVVVFPSSMQKTYNKLEMLEVTNCGLVEEIFELSFNGSSSVEDTTHLTEVTIDGLPKLKKIWSRDPHGILSFQNLINVKVESCEGLEYLLPLSVATHCSHLKELDIKYCGNMKEIVAEEKESSSVNATPIFEFNQLSTLLLWSLIRLKVFFAKKHTLACPSLKIIDVFNCPTLTLFRTLSTRRSNIGDDKHSVSTQQPLFIVEEVIPNLEMLRINHKDANMILQAQNSSGLLTKLKSLGLYGYKYEDTFPYWFLQNVRGLETLLIEESCFKKIFQDEGRMGEKTHTQIKELTLNDLPNLEHICEEGFRIDPVLEFLEYLWVSDCSSLTNLLPSSATFTHLVYLEIKDCNGLTKLITSSTAQSLINLTILKIKDCNSLEEIILGEENVPITFISLQILMLECLPNLNQFCSTKCFVKFPLLELVIVRECPRMKVFSEGYISTPNLRKVKIAENDEEWFWKGNLNDTIKTMFEDKVAFGKFKYLALSDYPEMKDLWYGQLDHQNVFCNLKHLVVHRCDFLSHVVFPSNVMQVLYGLEELEVTDCDSLEAVFDVKGMKSAQEILINQSTQLKKLTLSELPKLKHIWNEDPDDIINFGKLCTLNVSKCQSLLYIFPLSLCEDLGHLEMLEIEYCGVEQIVAMEEGSMEHSFNFPQLNKLKLVYLEKLTSFYCGKHSLDCPSLKVLDVHGCALNHLDWFSIEKLNPNMEELAINGTDVLGILNQGKNIFHKVEFLRLQYLDETPTIFLNEYFHTIFPNLERFEVRYGSFKALFPTTGYLGMQISKQIKILMLFKLEMLKHIWQEDFPLDHPLLQDLHELYVWDCPSLISLVPSSTSFTNLTSLVVENCKELNYLITSATAKSLIQLKRLEISNCEKMLDVVKIDDEKAEEDIIFQNLEYMEFTSMSSLGSFCNGNQTFIFPSLLTLIVKECPQMEIFSSGVTVAPCLSEIEVGEETIRWKGDINTTIQHLFQEKEVLRSNSVNETIISSHLQDDELGGQDGIEANPEE 2059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01861 2059 SMART LRR_typ_2 614 637 IPR003591 -
Trre2g01861 2059 SMART LRR_typ_2 546 569 IPR003591 -
Trre2g01861 2059 Gene3D - 142 301 IPR027417 -
Trre2g01861 2059 PRINTS Disease resistance protein signature 248 262 - -
Trre2g01861 2059 PRINTS Disease resistance protein signature 986 1002 - -
Trre2g01861 2059 PRINTS Disease resistance protein signature 342 356 - -
Trre2g01861 2059 PRINTS Disease resistance protein signature 175 190 - -
Trre2g01861 2059 Gene3D Ribonuclease Inhibitor 500 878 IPR032675 -
Trre2g01861 2059 SUPERFAMILY RNI-like 930 1230 - -
Trre2g01861 2059 Gene3D Ribonuclease Inhibitor 1498 1696 IPR032675 -
Trre2g01861 2059 Gene3D Ribonuclease Inhibitor 1238 1437 IPR032675 -
Trre2g01861 2059 SMART AAA_5 172 308 IPR003593 GO:0016887
Trre2g01861 2059 Coils Coil 68 88 - -
Trre2g01861 2059 SUPERFAMILY RNI-like 1623 1982 - -
Trre2g01861 2059 Coils Coil 40 60 - -
Trre2g01861 2059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 406 IPR027417 -
Trre2g01861 2059 SUPERFAMILY RNI-like 1368 1686 - -
Trre2g01861 2059 Pfam NB-ARC domain 158 393 IPR002182 GO:0043531
Trre2g01861 2059 Gene3D - 308 396 IPR042197 -
Trre2g01861 2059 Gene3D Ribonuclease Inhibitor 1727 2036 IPR032675 -
Trre2g01861 2059 Gene3D Ribonuclease Inhibitor 915 1237 IPR032675 -
Trre2g01861 2059 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1283 1501 - -
Trre2g01861 2059 SUPERFAMILY L domain-like 464 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01861 Trre-Chr2 15270875 15282898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01861 174 625 WRKY Transcription Factor Family AT5G45050 24.536 2.36e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01861 - - tpra:123924644 2605.86