Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01840 ATGTCACTACTGAAAACTTTGACTCTTGAAAACAATAATTTCTGGGGCATTATTCCATCAAATAAGGGATACAATCTTCCAAAATTGCAATATTTACACTTGGATCATAACAATTTTGTTGGAAATATTCCAAATAGTATATTCAATTCTTCTGAGCTGATTGATCTCCAATTGAATTCCAATGCATTTAGTGGAACTCTACCAAATACTGCTTTTGGAAATTTAAAGTTCCTCAAAAGAATTCTCATATATCACAACAATTTGACAATAGATGATTCTCATCAATTTTTTACTTCCTTGTCAAATTGTAGATCTTTAGCATATCTAGAAATAGCAGGGAATCATATACCATCCAATCTTCCTAAGTCAATTGGAAACATAACTTGCATAAAATTTGTGGCAGATTCATGTGGATTTGTTGGTAATATTCCCCTAGAAGTTGGAAACATGAGCAAATTGATATACTTTGATCTATTTGGGAATAACATGAATGGACCAATACCTAGTACATTCAAAGGGTTACAGAACCTTCAGTTATTGGATCTTGGAAATAGTGGAATACAAGGATCATTTATTGAGGAGCTATGTGAAATTCAGAGTTTGAGTGAGTTGTATCTTGAAAACAATAAGCTTTTTGGAGTTTTACCATCATGTTTGGCAAATATGACTTATCTTAGAAAGATATACATAGATTCTAACAATTTAAGCTCTACAATACCTTCCTCTCTTTGGAGTCTCAAAGATATCTTAGAGGTAAGTTTGTCCTCGAATGCATTCGTCGGTAATCTTTCACCCGAGATTGGAAATTTGAGAGCAATTACACTATTGGATCTATCAAGAAATCAAATTTCAAGTAACATTCCTTCAACCATCAGTTTCTTAAATAATTTGCAGAATCTCTCCTTAGCACAAAACAAACTGTATGGGTCAATTCCCGCATCACTTGGTGACATGGTAGGCTTGATCTCCTTGGACTTATCGCAAAATATGTTAACCGGTGTTATTCCAAATTCCGTAGAATCACTTTTATATCTTCAAAACATCAACTTGTCATACAATAGGTTACAAGGACGGATTCCTGATGTTGGAATTTTCAAAACTTTCACGGCTCAATCTTTTATGCATAATGAAGCACTTTGTCGTAATCCTCGCCTAAATGTACCTCTGTGTGATAATCATGTTAAGAAGAAAAGTTCAATAGTAAAGAAGCTATTACTCAAATGCATAATTCCCATAGCTGTGTCAACCATTTTGATTGTTGCAAGTATCATAATTTTGAAAGTTAAGAAAAGGAAAAAGGTTGCAAATACTCTTGAAAGAGGTTTATCAACTTTAGGAGCTCCTAGAAGAATTTCCTATTATGAACTTGTGCAAGCAACCAATGGATTCAATGAGAGTAACTTACTTGGAAAGGGGGGATTTGGCTCTGTGTATCAGGGGATGCTTCCCGATGGTGAGATGATTGCAGTTAAAGTAATTGATTTGCATTCAAATGTAAAATCAAAAAGCTTTGATACGGAATGCAATGCCATGAGAAATCTCAGACATCGGAATTTGGTTAAGATTATCAGTGGTTGTTCGAATCTTGATTTCAAAGCATTGGTGATGGAGTTCATGTCAAATGGAAGTGTGGACAAATGGTTATATTCAAATAACTATTGTTTAAACTTCTTACAAAGGTTAAACATAATGATAGATGTTGCATCTGCATTGGAGTATCTCCATCACGGTTCTTTAATACCTGTGGTTCATTGTGATCTAAAGCCAACTAATGTGTTGCTGGATGAAAATATGGTTGCCCATGTTAGTGATTTTGGTATTGCCAAGCTCATGGATGAAGGACAATCTAAAACACATACAGAGACTTTGGCTACTATTGGATACCTTGCACCAGAGTATGGATCTGGTGGAATTGTTTCCGTCAAAGGAGACGTGTACAGCTATGGGATTATGCTAATGGAAATCTTCACAAGAAAAAAACCAACAGATGATATGTTTGTTGCAGAGCTAAGTTTGAAAAAATGGATCAGTGAACCAACAGATGATATGTTTGTTGCAGAGCTAAGTTTGAAAAAATGGATCAGTGAATCAATGCCTAATTCTATTATGGATGTCTTGGATTCTAATTTAGTCCAACAATATGGGGAACAAATTGATGACATAGTTACATACATGTCAACTATTTTTGGTTTAGCCATGAATTGTTGTGAATATTCACCTGAAGCAAGAATTAATATGGCAGATGTTACTGCTTCCCTAATCAAACTCAAGACTTTGGCTCTTAGCAAAAACATGGTCTAG 2301 0.3468 MSLLKTLTLENNNFWGIIPSNKGYNLPKLQYLHLDHNNFVGNIPNSIFNSSELIDLQLNSNAFSGTLPNTAFGNLKFLKRILIYHNNLTIDDSHQFFTSLSNCRSLAYLEIAGNHIPSNLPKSIGNITCIKFVADSCGFVGNIPLEVGNMSKLIYFDLFGNNMNGPIPSTFKGLQNLQLLDLGNSGIQGSFIEELCEIQSLSELYLENNKLFGVLPSCLANMTYLRKIYIDSNNLSSTIPSSLWSLKDILEVSLSSNAFVGNLSPEIGNLRAITLLDLSRNQISSNIPSTISFLNNLQNLSLAQNKLYGSIPASLGDMVGLISLDLSQNMLTGVIPNSVESLLYLQNINLSYNRLQGRIPDVGIFKTFTAQSFMHNEALCRNPRLNVPLCDNHVKKKSSIVKKLLLKCIIPIAVSTILIVASIIILKVKKRKKVANTLERGLSTLGAPRRISYYELVQATNGFNESNLLGKGGFGSVYQGMLPDGEMIAVKVIDLHSNVKSKSFDTECNAMRNLRHRNLVKIISGCSNLDFKALVMEFMSNGSVDKWLYSNNYCLNFLQRLNIMIDVASALEYLHHGSLIPVVHCDLKPTNVLLDENMVAHVSDFGIAKLMDEGQSKTHTETLATIGYLAPEYGSGGIVSVKGDVYSYGIMLMEIFTRKKPTDDMFVAELSLKKWISEPTDDMFVAELSLKKWISESMPNSIMDVLDSNLVQQYGEQIDDIVTYMSTIFGLAMNCCEYSPEARINMADVTASLIKLKTLALSKNMV 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01840 766 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 539 678 - -
Trre2g01840 766 SUPERFAMILY Protein kinase-like (PK-like) 444 756 IPR011009 -
Trre2g01840 766 Gene3D Phosphorylase Kinase; domain 1 446 538 - -
Trre2g01840 766 Pfam Leucine Rich Repeat 200 221 IPR001611 GO:0005515
Trre2g01840 766 Pfam Leucine Rich Repeat 321 342 IPR001611 GO:0005515
Trre2g01840 766 PANTHER OS04G0122200 PROTEIN 1 756 - -
Trre2g01840 766 Pfam Protein kinase domain 464 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01840 766 ProSiteProfiles Protein kinase domain profile. 463 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01840 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Trre2g01840 766 SMART LRR_typ_2 270 294 IPR003591 -
Trre2g01840 766 SMART LRR_typ_2 318 341 IPR003591 -
Trre2g01840 766 SMART LRR_typ_2 222 246 IPR003591 -
Trre2g01840 766 SMART LRR_typ_2 198 221 IPR003591 -
Trre2g01840 766 SMART LRR_typ_2 26 50 IPR003591 -
Trre2g01840 766 FunFam Serine-threonine protein kinase plant-type 444 538 - -
Trre2g01840 766 SUPERFAMILY L domain-like 3 188 - -
Trre2g01840 766 Gene3D Transferase(Phosphotransferase) domain 1 539 764 - -
Trre2g01840 766 SMART serkin_6 463 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01840 766 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 99 394 - -
Trre2g01840 766 SUPERFAMILY L domain-like 136 383 - -
Trre2g01840 766 ProSitePatterns Protein kinases ATP-binding region signature. 469 491 IPR017441 GO:0005524
Trre2g01840 766 Gene3D Ribonuclease Inhibitor 131 391 IPR032675 -
Trre2g01840 766 Gene3D Ribonuclease Inhibitor 1 130 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01840 Trre-Chr2 15086341 15089074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01840 1 757 Receptor kinase-like Gene Family AT3G47570 34.444 7.25e-141 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre2g01840 Pkinase 5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01840 - K13420 mtr:25481440 1044.26