Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01810 ATGGTGAATGATTCAACAACGTACGATTCCATGAAGTACGATGATAATGGTGAAAGGATTGTGATGTTGTTTGGTGTGAACATCGCAAAAAATCCAACCAAAGTTGATGACACTCCAAAAGACAGATCTAGTATGGAAAACATCAATTATATCCCTCATGACAAAATAAATATCACTCATAACAATAAAGATATTTCTATTTTTGAACACGAGAATGAAAATGAAAAGGAGAATGAGAATAATGAACGTTCAGAATTTAATATTGGTCAAAATTCCAAGCATGAGAAGATGAAGAGCGTGATACCATGGACACCAAAAGAGCATAGGGCTTTCTTGAAAGGTTTAAAGGCTGTTGGAAAAGGAAGATGGAAGCATATATCAAAAAATTATGTGATGACCAAGGATCCTACTCAGGTTGCTAGTCATGCACAAAAGTTTTTTCAAAGAAGTGAAATTGACCCAATGTTTAGAAACAAGCGCCAAAGCATCTTTGACATGAAACTTCTTGTATGGATGATGAATATGAAGATTCAAAAGCTTCTGGTGTTTCTTCTTCATTGGGACCATCCTCCAGAAGCAACTCTCATTAGATGTAAGTGCAGCAATACATAA 612 0.3529 MVNDSTTYDSMKYDDNGERIVMLFGVNIAKNPTKVDDTPKDRSSMENINYIPHDKINITHNNKDISIFEHENENEKENENNERSEFNIGQNSKHEKMKSVIPWTPKEHRAFLKGLKAVGKGRWKHISKNYVMTKDPTQVASHAQKFFQRSEIDPMFRNKRQSIFDMKLLVWMMNMKIQKLLVFLLHWDHPPEATLIRCKCSNT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01810 203 Coils Coil 67 87 - -
Trre2g01810 203 MobiDBLite consensus disorder prediction 71 92 - -
Trre2g01810 203 Pfam Myb-like DNA-binding domain 102 145 IPR001005 -
Trre2g01810 203 SUPERFAMILY Homeodomain-like 98 149 IPR009057 -
Trre2g01810 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 151 IPR017930 -
Trre2g01810 203 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 149 IPR006447 GO:0003677
Trre2g01810 203 Gene3D - 101 152 - -
Trre2g01810 203 ProSiteProfiles Myb-like domain profile. 102 147 IPR001005 -
Trre2g01810 203 SMART sant 99 149 IPR001005 -
Trre2g01810 203 PANTHER TRANSCRIPTION FACTOR KUA1 20 167 - -
Trre2g01810 203 MobiDBLite consensus disorder prediction 71 94 - -
Trre2g01810 203 CDD SANT 102 147 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01810 Trre-Chr2 14832146 14835915 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre2g01810 Myb_DNA-binding 9.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01810 - - mtr:25483182 122.094