Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre2g01809 | ATGGGCTCGGTCGACAAATATCACGTGATCGAGCTAGTCGGCGAAGGTTCCTTCGGTAAAGTCTACAAAGGAAGACGCAAATACACCGGACAGACTGTTGCGATGAAGTTCATCATGAAGCACGGTAAAACTGAAAAGGATATTCACAATTTGAGACAAGAAATTGAGATATTAAGGAAGTTGAAGCATGAAAATATTATCCAAATGCTTGATTCCTTTGAAACCCCACAAGAGTTTTGTGTTGTCACAGAATTCGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAATGCCTTCCCGAGGAACAAGTCCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATCCATCGTGATATGAAGCCCCAAAATATTCTTATTGGTTCCGGATCTATTGTCAAGCTTTGTGATTTTGGATTTGCACGTGCAATGTCCACAAACACAGTTGTTTTGAGATCTATAAAAGGCACTCCATTATACATGGCTCCCGAACTTGTCCGGGAACAACCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTCGTAGGCCAACCACCATTTTACACAAATTCTGTTTATGCTCTCATCAGACACATTGTTAAGGATCCAGTTAAATATCCTGATCATATGACTCCAAATTTCAAAAGCTTTTTAAGGGGTTTGCTTAACAAGGCACCAGAAAGTAGACTAACTTGGCCGGCTCTTCTTGAACACCCGTTTGTTAAAGAAACTAACGACAACATTGAAGTCAGGGAATTGCGTGAGATAAGTGGGTCACCAAGGGACAGCAATATAGCACAAAAGGTTGAAGCTAAAACGATTCAAACTTCAACAGGTTTGGAAGAGCATATTGCTTCACCACTTCAGAATGAAGCTCAGTTAAATGTTCCTAACATGAACAAAACCAATTCTAAAGTGCTTGATGAGTCTCCCGGATTTTCAAATCAAAATGATGTAGGCGAGTCAGGCTGCGAAAGACTGGACAGACTCGAAAGTAACTCTCGCACTGCCAAAGGTGCAAAAGTAATTGGACAAGACAAGGAGGCATTGGAACATGTTCTGCAACCACTGAAACGATGGTCAAAGGGATCTCAAAATATTGGCAGTGATCAAGATCTTCCTGCTTCAAACCAGTCACTGAGAATTCTGTCAAATCTAGTTGCTGCCGGTGTCTTCAGTTCTATTGGACAAATAGATGAACTAATAAGCGAGCTCCTTTCGTTTATCAGATCTATTTTAGCAATGAAATCTGCTGAAGTTTTTGACTTGTTAACAAAGGGTTTCTCTATCACTAAAATTTTGCTAGATAATGGTGGGAGTTCTTGTTCAAGCTCATATTTAAATCACTGGGTTGAATTGGTTGAAATTTATTCTCAGGTCGTAACTTCGAACAATGATGCATCTGGAAGAGTTCTTTATGAGTCTAGCGCCTGCATCACGGTTATTTTGTCTAAAGTTTCTCAGGTGCTTAGATCATCTCAAGTTTCAGGCTCAGAGACACTGAACGTAACAGCTAACAGAATCATAGAGCATGCAAAAACATCTGGTTTAGTAGACCATTTGTGCCAGTGCTTAGCAACATCAGGCTCAAGTCTTATTGCTGGTTCTTCCAATATGCTACGGGCTGCTTCTGAAGCACGCAGAGCTGCCTGGTCCTTGATTAATGCTCTGGACACCCTTTTTAATAAAAAAAGTGCCATTTTGTTTCCAATCAGTGCATTGCCGAGTCATTTGTTGAAGAGGACAGAAATTATGGATCACAGACAAGATCCCTTGTACGATGAAGAATCAACAAAAATGGTTGATGCAGTGACAAGAGCATTCCTGAGATCCAAAACTGTTCAGGTTGCTGTGTACTATTGTTTTCACCAACGCATTGAGTCTGCTACGATTTGTGGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCATAGTGGAATTGTTCCAGCCGTTCTTTGTGGTCTGCCCAGTTCCCTTCCTGTGACTACTGTTGTTAGTGGTGGCGGTGATGGAACAATTGTTTCCGAGATTTTCTCGGTTTTGTCAATATGCAGTTCCTCTCTCAACAAAGATGAACACAGTTTAGAACCAAGTAACACTAAATGCAAATTAGCAAACCCTTCTGCTCTGATTCGTCATTCATGTCTTATTCTTACAATAATTGCACAATATTTGAAGTCAACAGGAAGAAATTCTGCAATTTTTATGCTCACCAACTCACCAAAGAAGCAGCTCGCTCGACTCTCAGTTCTTGCTCATCATGTTTCTTATGATGATAAAACAAAAGCCTCTTTCCAACTTCAAAGTTCATCAGCCATGTTGGCTTTGGCATCCATTCTTTCGCTCGAATCTGGGACTTTGGTTGAGTCTTCAATATCTGAAATTGCTATGCCTTTAATTCCTCGAGCTTCTACACTAAGTGACCATCTAAAATTTTTATCAGGAAATGAAAATGAACCGGGCCCTGGCAATTTTACTGGGAAGCTCCCATATTGGCTAGGGGTAAGAGATGGGTGTGTTGGTCTTGTAGATTCCAAACTCAAGTGGGGGGGACCATTAGCTATTCAGCAGTTGTGTGCAAGTGGTATACCACTACTTCTAATCGGCTTATTAAGCAATGCATTTTTAAATCCTTCTCAAGAAAACGAGTGCCTAAACGATAGAGTTGGATTTTCTCCTATAGGCGTTGTCTGGACAGTTTCATCATTATGTCATTGTCTCTCTGGTGGTGCTTTGATTTTTCGTCAGATTTTGATTAGGAATGAACATGTTAAACTTGTATCCAACTTAATATGTGATGTTCATCTTAAGTTGATAAAATGCTGGACCGGACCTGGAGGAGGGAGATTCGGGGTCAGAGATCTAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCACCTGGCTTGCCATCAGCCACTGCATCTGTCAGCAGTGGGTTTCTTCTTAACGTTGGTTCCCCTGGTCAGAGAGTTTACATGGAAGACAAGGATACAGTTAAGGCAATAGAAGAAGACATGAGCAAATACATTAAGATCCTCGCGGAGGTTGGTGTGCCTAGTATTATCCTTCGATGCCTCGATCATATGGAGTTGCACGATTTGGGCAGGCCTGTGGCCTTTCTTGCTAAAATGGTGTGCCAACGACCTTTAGCAGTCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGAATGAGAAGGTTGTTTGACTTGTCGGGACCAAAAGAGGTTATGCTGGATGCTCTTATGATAATTTCCGATCTTGCTCGTATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAAAATTTCTTTCACACGATGATCCGAATGTGCGTGCCAAAGCTTGCAGTGCTCTTGGCAATATGTGTCGCCACAGTGCCCAATTTTACAGTTCTCTTGCAAGATATCAAATCATTAGTATCCTTATTGATCGATGCTCTGATCCGGACAAACGTACAAGGAAGTTTGCCTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACGTGTTGTATGAAGAGTTGAGGAGTTCGATACCTCATTTGGCAAAATTGTTGCAAGTGGCAGAGGAAGACAAAACCAAGGCAAATGCTGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAGACTTTGTGGAGACATTGTGTCCAAAGGAGCAGTTCAGTCTCTTCTGGAGTTAATTTCCGATTATGCAGTTTCAGCGCTAAATCCAAGCAGAAATGATTCAACAAACGAGTCTCCTTTAAAGATTGCTCTCTTTTCCTTGGCGAAGATGTGTGCTCATCCACTCTGCAGACAGTTCATTCGTTCATCATCTTTGTTCCATGTAATTGGAAGGCTTCAGCAGTCTCCAGAATCTTCCATTGCCAAATATGCATCTGTGATCGTTAGCAAAGTTGAACCTTGA | 4002 | 0.412 | MGSVDKYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFETPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDHMTPNFKSFLRGLLNKAPESRLTWPALLEHPFVKETNDNIEVRELREISGSPRDSNIAQKVEAKTIQTSTGLEEHIASPLQNEAQLNVPNMNKTNSKVLDESPGFSNQNDVGESGCERLDRLESNSRTAKGAKVIGQDKEALEHVLQPLKRWSKGSQNIGSDQDLPASNQSLRILSNLVAAGVFSSIGQIDELISELLSFIRSILAMKSAEVFDLLTKGFSITKILLDNGGSSCSSSYLNHWVELVEIYSQVVTSNNDASGRVLYESSACITVILSKVSQVLRSSQVSGSETLNVTANRIIEHAKTSGLVDHLCQCLATSGSSLIAGSSNMLRAASEARRAAWSLINALDTLFNKKSAILFPISALPSHLLKRTEIMDHRQDPLYDEESTKMVDAVTRAFLRSKTVQVAVYYCFHQRIESATICGLQLLSRCCLHSGIVPAVLCGLPSSLPVTTVVSGGGDGTIVSEIFSVLSICSSSLNKDEHSLEPSNTKCKLANPSALIRHSCLILTIIAQYLKSTGRNSAIFMLTNSPKKQLARLSVLAHHVSYDDKTKASFQLQSSSAMLALASILSLESGTLVESSISEIAMPLIPRASTLSDHLKFLSGNENEPGPGNFTGKLPYWLGVRDGCVGLVDSKLKWGGPLAIQQLCASGIPLLLIGLLSNAFLNPSQENECLNDRVGFSPIGVVWTVSSLCHCLSGGALIFRQILIRNEHVKLVSNLICDVHLKLIKCWTGPGGGRFGVRDLINAVIDLLAFPFVALQNAPGLPSATASVSSGFLLNVGSPGQRVYMEDKDTVKAIEEDMSKYIKILAEVGVPSIILRCLDHMELHDLGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMRRLFDLSGPKEVMLDALMIISDLARMDKGFYEYIKGASILEFLKKFLSHDDPNVRAKACSALGNMCRHSAQFYSSLARYQIISILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEELRSSIPHLAKLLQVAEEDKTKANAAGALSNLVRNSDRLCGDIVSKGAVQSLLELISDYAVSALNPSRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSSLFHVIGRLQQSPESSIAKYASVIVSKVEP | 1333 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre2g01809 | 1333 | Gene3D | - | 1035 | 1331 | IPR011989 | - | |
| Trre2g01809 | 1333 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
| Trre2g01809 | 1333 | SUPERFAMILY | ARM repeat | 1095 | 1323 | IPR016024 | - | |
| Trre2g01809 | 1333 | FunFam | Aurora kinase A | 2 | 89 | - | - | |
| Trre2g01809 | 1333 | Coils | Coil | 41 | 61 | - | - | |
| Trre2g01809 | 1333 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 283 | IPR011009 | - | |
| Trre2g01809 | 1333 | FunFam | Serine/threonine-protein kinase 36 | 4 | 322 | - | - | |
| Trre2g01809 | 1333 | Pfam | Protein kinase domain | 7 | 257 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Trre2g01809 | 1333 | FunFam | Serine/threonine-protein kinase TIO | 1061 | 1330 | - | - | |
| Trre2g01809 | 1333 | PANTHER | PROTEIN KINASE RELATED | 4 | 1332 | - | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre2g01809 | K06228 | - | gmx:100792102 | 2130.91 |
Showing 1 to 1 of 1 entries