Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01775 ATGGCTCCTTCTTCTCCGATCAATACCGATTCGCAACCTCCTTCAACCGCAGAAAATGATCTTCAGCCATTCTTTGTTCTACATAAAGCTTCACCTCGGAGGAAAGATAGAACACCAGTCAGACAGGGAAAATCTCGCAAGAGAAATGAGCTTTCTCCTCAATCGCCACAGAGTGAAAAGAAACCAGAAGGAAGTACAAATGAAGAATGTGATCGCCATTTGTGTCAGCAAATGCAAATTGAAGCTTTTGATATTGTTTGGACAAAAATTGAATCTACCATTAAGGATGTCTTGAGAGAGCTCAATGCTAGTGTATTCAATAACATACAACAATGGGTTTTAGAGTGCTTCAATACTACTAGATTAGTTGGAGAACCTAGCATTGCTGAAGCTACTCGGTCTTTTCCTGTTCTAAATAATACTACTCCTGGGAAGTTGTACACTGCATTAGTTATTACTCGAAACATAGAGTTTGTTGATGACATAATGACATTTGAAGAGCTTGGCGTTTTCTTGAAATCCCATGGATGTCATGTAGCTATGCTTTCATCAATGGAGTTTTCGCTAAAAAATGGAATTGCTGGTTGCTTGAAAGCTTTATTGCGAGAGTTTCTAGGAGGTTCTTTTGACTCAGCTGATATATCAACCTTAGCATCATGGTATAGAGAACAAGAAAACTACAATAAACCCCTAGTACTGATCGTTAATGATTTGGAAAGGTGTTGCGGATCAGTCTTAACTGATTTTATCCTGATGCTGAGTGAATGGGTTGTCAAGGTGCCAATCATCTTAATATTTGGAGTTGCAACGACAGTGGATGCCCCAAGAAACATTTTTCCATCGCATGCTCTTGAGTGTTTGTCCCCTTCTACGTTTATGCTTGTAACACCAGCTGAGAGAATGGACGCAATTGTTGTGGCAGTTCTTGTAAAACACTATACGACTTTTAATATCAGTCATAAAGTGGCACAGTTTTTGAAAAACTACTTCATCAACCAGGATGGGACAGTAACATCTTTTATAAGAGCTTTGAAGGTAGCATGCTTATTACACTTCTCTATGGAACCTTTGAGTCTCATACAAGGGAGAATTCTTGTTGAAGATCAGGATGCAACATCTGGATTATCACCTGAGACTATGTTGAAATACATGGATGAACTTCCATCATATGCAAGGAATAAAATGGTTGATCAGACTAAGAAGAGCATGGCTGAGGGTTTGTCAGAATTGGTGACAGTGCAGAAACTATGGAGTACTGTGGTTCTATGCCTATATGAGGCTGGAAAATATAGCAGAGTGCGGCTGCTGGATTTGTTTTGTGAAGCACTCAATCAAGTTTTGTACCCATCAAGGGATTCTGTTTGTCATACGAGTAATGAAAAAGACCATCATGGGTTGTCCTCAACAAATGATCCCTGTCAGCAATATTCCATCTTGCAAAGTGGAGGTTTTATTTGCCAGATAGCACGCAGAGTGAGGGATCTCCCTGCAGGAAAGCTAGATCAATTGATTGATAGTTGGGAAAAAATTACTGCAGATATTTCAGAGATTCACGAGAAACTGAAAATCTTGCAATCTTCAGTAAGTTGTAAAGATGGAAAGAGTTCACGCAGGAGTTCCAAGGACATTTCCAAGAGATCTGTGTCCAAAAACATTGACAAGGACTCAAGATTTTCAAACTTGCAAGCTATCGCATTTCTTGACGATTTAGTTAGAAATTATCTGAAGCCCATTGAAGGAATGCCTTTCCATGAAATTTTCTGCTTCAACAATGTTGAGAAGCTTCAATTGATTTTGATCGGAGATCCAAGGAGAAGGATTCAAGTTGATCTGTTGGATTTCCATGATATTTTAGGATGTAGTTGCTGCAACAAGAGTGGCAAGGGACTATTGCCATCCATGCATGATTCATCAATTATGTACTCACTAGCTCAAGAACATGGAGATCTTATCAATCTTCATGATTGGTTCCAGTCATTTAGAACAATTGTTCTTCAAAATACAAATAAACGGAAACAAAAATCGAAGAACACCCCCTTATCAAAGAAGAGAAAAGAAATGAATGGATCTGGAGACCAAAATGAAGCCTCAATTCAAGCACGATTTTGCAGAGGAGTTACGGAGCTGCAGATCACTGGGCTAGTTCGAATGCCTAGCAAGAGACGTCCAGATTTTGTACAGAGAATGGCATTTGGAATTTGA 2202 0.3924 MAPSSPINTDSQPPSTAENDLQPFFVLHKASPRRKDRTPVRQGKSRKRNELSPQSPQSEKKPEGSTNEECDRHLCQQMQIEAFDIVWTKIESTIKDVLRELNASVFNNIQQWVLECFNTTRLVGEPSIAEATRSFPVLNNTTPGKLYTALVITRNIEFVDDIMTFEELGVFLKSHGCHVAMLSSMEFSLKNGIAGCLKALLREFLGGSFDSADISTLASWYREQENYNKPLVLIVNDLERCCGSVLTDFILMLSEWVVKVPIILIFGVATTVDAPRNIFPSHALECLSPSTFMLVTPAERMDAIVVAVLVKHYTTFNISHKVAQFLKNYFINQDGTVTSFIRALKVACLLHFSMEPLSLIQGRILVEDQDATSGLSPETMLKYMDELPSYARNKMVDQTKKSMAEGLSELVTVQKLWSTVVLCLYEAGKYSRVRLLDLFCEALNQVLYPSRDSVCHTSNEKDHHGLSSTNDPCQQYSILQSGGFICQIARRVRDLPAGKLDQLIDSWEKITADISEIHEKLKILQSSVSCKDGKSSRRSSKDISKRSVSKNIDKDSRFSNLQAIAFLDDLVRNYLKPIEGMPFHEIFCFNNVEKLQLILIGDPRRRIQVDLLDFHDILGCSCCNKSGKGLLPSMHDSSIMYSLAQEHGDLINLHDWFQSFRTIVLQNTNKRKQKSKNTPLSKKRKEMNGSGDQNEASIQARFCRGVTELQITGLVRMPSKRRPDFVQRMAFGI 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01775 733 MobiDBLite consensus disorder prediction 1 69 - -
Trre2g01775 733 MobiDBLite consensus disorder prediction 668 695 - -
Trre2g01775 733 CDD Orc3 574 731 - -
Trre2g01775 733 MobiDBLite consensus disorder prediction 29 48 - -
Trre2g01775 733 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 16 732 IPR020795 GO:0003677|GO:0005664|GO:0006260
Trre2g01775 733 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 66 359 IPR045667 -
Trre2g01775 733 CDD Orc3 81 360 - -
Trre2g01775 733 Pfam Origin recognition complex winged helix C-terminal 604 731 IPR040855 -
Trre2g01775 733 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01775 Trre-Chr2 14495429 14504501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01775 1 702 Core DNA Replication Machinery Family AT5G16690 45.619 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01775 K02605 - gmx:100780646 1117.83