Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01767 | ATGAATCTTTCTGGAACTTTAAATGCTAGCATTGGAGGACTTACCAATTTAACTTATCTCAATCTTGCTTACAATAGTCTTATTGGAAATATCCCTAAGGAGATTGGTGAGTGTTTGAGTTTAGAATATCTTTACTTGAACAATAATCAATTTGAGGGACCGATTCCTGTTGAATTGGGGAAACTGTCCCTTTTGAGAAATTTGAATATTTGCAACAATAAACTCTCCGGTGTTATACCGGATGAGTTTGGAAAGTTGAGTTCATTGGTTGAGTTAGTTGCTTATAGCAACTTTCTAGTTGGCCCTTTGCCAAATTCAGTTGGAAATCTTAAGAATCTTGCGACTTTCAGAGCTGGTGCGAATAACATTACTGGTAGCTTGCCGAAGGAAATTGGCAGATGTAAGAGTTTGGTACGTCTTGGTCTTGCTCAAAATCAGATCGAAGGGGAGATACCGAGCGAGATTGGGATGCTCGAAAGATTAAAAGAATTGGTTTTATGGGAAAACCAGTTGTCAGGAGTTGTTCCTAAAGAGCTTGGGAATTGTAGCAGGCTTGAGATTCTTGCTTTATACGGGAATAATCTCATTGGACCGTTACCTCGTGAGATTGGAAACCTGAAATCGTTGAAGTGGTTGTATCTTTACAGGAATAAGTTGAATGGATCCATTCCAAAGGAAATTGGAAATCTTTCTTCAGCCTTACACATTGATTTCTCGGAGAACTCTTTAGGCGGAAATATCCCTTCAGAGTTCAGCAAAATTCGAGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCATTTAACCGGTGTTATACCAAATGAGTTTGGTAGTTTGAAGAACCTGACGAAGCTGGACCTGTCGATAAACAACATTACGGGTCCGATTCCACATGGTTTCCAATATTTGACTCATATGTCTCAGTTGCAACTTTTCGACAACTCCTTAAGCGGTATTATTCCTCAGGGACTTGGACTTCATAGTCGTCTTTGGGTGGTTGATTTTTCTGACAACAACTTGACAGGAAATATACCTCCTCATCTATGCCGAAACTCTCATTTGATGATGTTGAATGTAGCAAATAATCAGCTTTACGGAAACATACCGACAGGGATATTGAAATGTGAATCGTTGGCACAGTTGCTGTTGGTCGGTAACAGGCTTACTGGTGGCTTCCCTTCGGAATTGTGTAAACTGGAGAATCTAACTGCCATTGATTTGAGTGATAACAGGTTCAGCGGTCCACTTTCTCGTGAGATCGTAAACTGCCACAACTTGCAAAGGCTTCACATTGCGAGCAATTACTTCACATTGGAGTTGCCGAAAGAAATAGGAAATCTCTCACAATTGGTGACTTTTAATGTTTCATCAAATCATTTCACCGGAAGAATCCCACCAGAAATTTTTTGGTGCCAAAGGCTGCAGCGGCTCGATCTCAGTCAGAATCGTTTTACCGGTTCTTTACCAAATGAACTTGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAGACAATAAATTGTCTGGAAATATTCCTCCAACATTAGGCAATCTGTCTCATTTGAACTGGTTGCGGATGGATGGCAATTTGTTTTTCGGTGAAATACCTCCTGAGTTAGGTTCTCTTTCGAGCTTACAGATTGAAATGGATCTCAGTTACAATAATCTTTCCGGAAGAATACCATCTCGGCTTGGCAATCTCAATATGCTTGAAAATCTCTTTCTCAATAACAACCATTTGGAAGGTGAAATTCCAAGTACGTTTAGCGCGCTTTCAAGCTTGATGGGGTGTAATTTCTCATACAATAACCTCACCGGCCCTATCCCTTCCACTAAAATTTTCGAAAGTATGGCTTTAAGCAGCTTTGTTGGTGGTAACATAGGCCTTTGTGGTACACCTCTCATTGACTGCAATAGCATTTCAGCTTCTCGTTCGATTCCTCCTGGGAAAGACGTTGATTCTCCTCGTGCTAAAATTGTCATGATCATTGCAGCTACTGTCGGCGGTGTTTCTCTCATTTTGATTTTAGTTATTTTATATCTTATGAGACAACCTCGAGAGGCTGTTGATTCATTTGCAGACACTGAAACTCAATCCCCGGATTCTGATATCTATTTCCCTCCAAAGGACGGTTTCACGTTCCAAGACTTACTTGAAGCTACAAAAAGATTTCACGAAAGTTATGTCATTGGTAGCGGAGCATGTGGAACAGTTTATAAGGCGGTTATGAAATCTGGTAAGACCATTGCTGTTAAGAAGTTAGCATCAAACCGGGAGGGGAACAACGTCGATGATAGTTTCAGGGCTGAAATATCGACTCTAGGAAGGATCAGGCATCGGAATATAGTGAAGCTGTATGGTTTTTGCTATCACCAAGGTTCTAATCTCTTACTTTATGAATACATGGAAAGAGGTAGCTTAGGTGAATTATTGCATGGTTCTGCAAGTAATTTGGAGTGGCCGACTCGATTCATGATTGCTCTTGGAGCTGCTGAAGGTCTTGCATACTTGCATCATGACTGTAAACCGAAGATTATTCACCGTGACATAAAATCTAACAACATTCTTCTTGATGAAAATTTTGAGGCCCATGTTGGTGATTTCGGTTTGGCAAAAGTGATTGACATGCCTCAGTCAAAATCGATGTCCGCAGTTGCCGGATCTTATGGTTATATAGCTCCTGAATATGCATACACCATGAAGGTTACAGAGAAATGCGACATATATAGTTACGGTGTTGTACTCTTGGAATTGCTAACCGGAAAAACACCGGTTCAACCAATGGAGCAAGGAGGTGATCTTGTCACATGGACAAGAAACCATATTAGGAACAATAACAATACATTGAGCTCAGAGATGCTCGACAATCGTCTAGATCTCGATGACCAAATAACTATATATCACATGCTCACTGTTTTGAAACTCGCTTTAATGTGCACAAGTATGACTCCTACTAAGAGACCATCAATGCGCGAAGTTGTGTTGATGCTCATCGAATCAAATGAACGAGAAGGAAACTTAACACTCACTCAAACAAATCATGACCCTCCTTCCAAAGATAGCACATGA | 3069 | 0.4057 | MNLSGTLNASIGGLTNLTYLNLAYNSLIGNIPKEIGECLSLEYLYLNNNQFEGPIPVELGKLSLLRNLNICNNKLSGVIPDEFGKLSSLVELVAYSNFLVGPLPNSVGNLKNLATFRAGANNITGSLPKEIGRCKSLVRLGLAQNQIEGEIPSEIGMLERLKELVLWENQLSGVVPKELGNCSRLEILALYGNNLIGPLPREIGNLKSLKWLYLYRNKLNGSIPKEIGNLSSALHIDFSENSLGGNIPSEFSKIRGLSLLFLFENHLTGVIPNEFGSLKNLTKLDLSINNITGPIPHGFQYLTHMSQLQLFDNSLSGIIPQGLGLHSRLWVVDFSDNNLTGNIPPHLCRNSHLMMLNVANNQLYGNIPTGILKCESLAQLLLVGNRLTGGFPSELCKLENLTAIDLSDNRFSGPLSREIVNCHNLQRLHIASNYFTLELPKEIGNLSQLVTFNVSSNHFTGRIPPEIFWCQRLQRLDLSQNRFTGSLPNELGTLQHLEILKLSDNKLSGNIPPTLGNLSHLNWLRMDGNLFFGEIPPELGSLSSLQIEMDLSYNNLSGRIPSRLGNLNMLENLFLNNNHLEGEIPSTFSALSSLMGCNFSYNNLTGPIPSTKIFESMALSSFVGGNIGLCGTPLIDCNSISASRSIPPGKDVDSPRAKIVMIIAATVGGVSLILILVILYLMRQPREAVDSFADTETQSPDSDIYFPPKDGFTFQDLLEATKRFHESYVIGSGACGTVYKAVMKSGKTIAVKKLASNREGNNVDDSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASNLEWPTRFMIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPMEQGGDLVTWTRNHIRNNNNTLSSEMLDNRLDLDDQITIYHMLTVLKLALMCTSMTPTKRPSMREVVLMLIESNEREGNLTLTQTNHDPPSKDST | 1022 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01767 | 1022 | Pfam | Leucine rich repeat | 256 | 315 | IPR001611 | GO:0005515 | |
Trre2g01767 | 1022 | Pfam | Leucine rich repeat | 160 | 219 | IPR001611 | GO:0005515 | |
Trre2g01767 | 1022 | Pfam | Leucine rich repeat | 472 | 530 | IPR001611 | GO:0005515 | |
Trre2g01767 | 1022 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 326 | 641 | - | - | |
Trre2g01767 | 1022 | Gene3D | Ribonuclease Inhibitor | 373 | 641 | IPR032675 | - | |
Trre2g01767 | 1022 | Gene3D | Ribonuclease Inhibitor | 110 | 261 | IPR032675 | - | |
Trre2g01767 | 1022 | SUPERFAMILY | RNI-like | 2 | 316 | - | - | |
Trre2g01767 | 1022 | Gene3D | Ribonuclease Inhibitor | 1 | 107 | IPR032675 | - | |
Trre2g01767 | 1022 | FunFam | Probable leucine-rich repeat receptor-like protein kinase At2g33170 | 104 | 197 | - | - | |
Trre2g01767 | 1022 | Gene3D | Transferase(Phosphotransferase) domain 1 | 802 | 1015 | - | - | |
Trre2g01767 | 1022 | Gene3D | Ribonuclease Inhibitor | 262 | 371 | IPR032675 | - | |
Trre2g01767 | 1022 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase | 689 | 801 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_sd22_2 | 398 | 424 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_sd22_2 | 206 | 232 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_sd22_2 | 14 | 33 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_sd22_2 | 278 | 304 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_sd22_2 | 494 | 520 | - | - | |
Trre2g01767 | 1022 | Pfam | Protein kinase domain | 725 | 994 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01767 | 1022 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 257 | 998 | - | - | |
Trre2g01767 | 1022 | SMART | serkin_6 | 724 | 997 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01767 | 1022 | FunFam | Piriformospora indica-insensitive protein 2 | 7 | 103 | - | - | |
Trre2g01767 | 1022 | SUPERFAMILY | RNI-like | 235 | 610 | - | - | |
Trre2g01767 | 1022 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B | 198 | 302 | - | - | |
Trre2g01767 | 1022 | Gene3D | Phosphorylase Kinase; domain 1 | 690 | 801 | - | - | |
Trre2g01767 | 1022 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 845 | 857 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g01767 | 1022 | SUPERFAMILY | Protein kinase-like (PK-like) | 701 | 997 | IPR011009 | - | |
Trre2g01767 | 1022 | FunFam | Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 | 802 | 1014 | - | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 14 | 38 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 206 | 230 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 302 | 326 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 494 | 518 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 158 | 181 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 567 | 590 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 278 | 301 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 62 | 85 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 398 | 422 | IPR003591 | - | |
Trre2g01767 | 1022 | SMART | LRR_typ_2 | 446 | 470 | IPR003591 | - | |
Trre2g01767 | 1022 | ProSiteProfiles | Protein kinase domain profile. | 724 | 998 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01767 | Trre-Chr2 | 14445569 | 14449048 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01767 | 1 | 999 | Receptor kinase-like Gene Family | AT5G56040 | 37.843 | 0.0 | 618 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Trre2g01767 | Pkinase | 1.7e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01767 | - | - | gmx:100805792 | 1668.29 |