Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01734 ATGCCAATTGCTGTAAAGACTCTCAATAGAGAAGGAACTCAAGGTCACAAAGAATGGGAGGCTGAAATTAACTATCTTGGTGCTCTCCAACACCCAAATTTGGTTAAACTTGTTGGCTACTGCATTGAAGATGAACACAGGATGCTTGTTTATGAGTTTATGCGAAGAGGATGCCTTGAAAATCATTTGTTTGGGAGATTAACTACACCTCTACCATGGGCTGTGAGAATCAAAATTATGCTTGGTGCTGCAAAAGGACTTGCATTTCTCCATGAGGAATCTGAAAGGCCACTCATTTACAGAGATTTCAAAACCTCAAATATCCTATTGGACTCGGCATACAATGCTAAACTTTCTGATTTTGGGCTTGCTAAAGATGCTCCAGTTGGAGACAAGACTCATGTTTCAACTCTAGTGATGGGAACTCAAGGCTATGTAGATCCTGAGTATGTGATCACAGGACACCTTACCTCCAAGAGTGATGTCTATAGTTTTGGTGTGGTTCTCCTTGAGGTGTTAACCGGAAGACAAGCAATTGATTACAAAAGGTCAGAAAAGGAACAGTGTTTGGTGGAATGGGCCAAACCATACTTAAAACCTGGAATAGGATTTTATCAATTGATGGACCCAAAGCTTCAAGGTCAATTCTCACCAAGAGGAGCATATAAAGCAATGAAATTGGTTTCACTTTGTCTTAGCCCTGCCCAAAAATCAAGACCTAAAATGAGTGAAATTGTTAAGATGCTCCAATATATCCTTCACTGCAATTGTGACATGCCTATGCCTACATTAACAATTAAGAGTTCACATGCTGGCCCTTCCTCTTATAATTCCTCTAGACATGGTGGTAATCATGTTAACAAACATCCATCTAGATTCAATAGTCACCATTGA 894 0.3982 MPIAVKTLNREGTQGHKEWEAEINYLGALQHPNLVKLVGYCIEDEHRMLVYEFMRRGCLENHLFGRLTTPLPWAVRIKIMLGAAKGLAFLHEESERPLIYRDFKTSNILLDSAYNAKLSDFGLAKDAPVGDKTHVSTLVMGTQGYVDPEYVITGHLTSKSDVYSFGVVLLEVLTGRQAIDYKRSEKEQCLVEWAKPYLKPGIGFYQLMDPKLQGQFSPRGAYKAMKLVSLCLSPAQKSRPKMSEIVKMLQYILHCNCDMPMPTLTIKSSHAGPSSYNSSRHGGNHVNKHPSRFNSHH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01734 297 MobiDBLite consensus disorder prediction 268 284 - -
Trre2g01734 297 ProSitePatterns Serine/Threonine protein kinases active-site signature. 98 110 IPR008271 GO:0004672|GO:0006468
Trre2g01734 297 PIRSF ILK 1 259 - -
Trre2g01734 297 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g01734 297 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Trre2g01734 297 Gene3D Transferase(Phosphotransferase) domain 1 55 260 - -
Trre2g01734 297 MobiDBLite consensus disorder prediction 268 297 - -
Trre2g01734 297 FunFam Serine/threonine-protein kinase PBS1 54 266 - -
Trre2g01734 297 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Trre2g01734 297 PANTHER OS01G0588500 PROTEIN-RELATED 2 251 - -
Trre2g01734 297 Pfam Protein tyrosine and serine/threonine kinase 2 249 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01734 Trre-Chr2 14015483 14018075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01734 1 252 Glycoside Hydrolase AT3G07070 52.941 1.14e-88 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre2g01734 PK_Tyr_Ser-Thr 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01734 - - tpra:123891935 442.58