Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g01734 | ATGCCAATTGCTGTAAAGACTCTCAATAGAGAAGGAACTCAAGGTCACAAAGAATGGGAGGCTGAAATTAACTATCTTGGTGCTCTCCAACACCCAAATTTGGTTAAACTTGTTGGCTACTGCATTGAAGATGAACACAGGATGCTTGTTTATGAGTTTATGCGAAGAGGATGCCTTGAAAATCATTTGTTTGGGAGATTAACTACACCTCTACCATGGGCTGTGAGAATCAAAATTATGCTTGGTGCTGCAAAAGGACTTGCATTTCTCCATGAGGAATCTGAAAGGCCACTCATTTACAGAGATTTCAAAACCTCAAATATCCTATTGGACTCGGCATACAATGCTAAACTTTCTGATTTTGGGCTTGCTAAAGATGCTCCAGTTGGAGACAAGACTCATGTTTCAACTCTAGTGATGGGAACTCAAGGCTATGTAGATCCTGAGTATGTGATCACAGGACACCTTACCTCCAAGAGTGATGTCTATAGTTTTGGTGTGGTTCTCCTTGAGGTGTTAACCGGAAGACAAGCAATTGATTACAAAAGGTCAGAAAAGGAACAGTGTTTGGTGGAATGGGCCAAACCATACTTAAAACCTGGAATAGGATTTTATCAATTGATGGACCCAAAGCTTCAAGGTCAATTCTCACCAAGAGGAGCATATAAAGCAATGAAATTGGTTTCACTTTGTCTTAGCCCTGCCCAAAAATCAAGACCTAAAATGAGTGAAATTGTTAAGATGCTCCAATATATCCTTCACTGCAATTGTGACATGCCTATGCCTACATTAACAATTAAGAGTTCACATGCTGGCCCTTCCTCTTATAATTCCTCTAGACATGGTGGTAATCATGTTAACAAACATCCATCTAGATTCAATAGTCACCATTGA | 894 | 0.3982 | MPIAVKTLNREGTQGHKEWEAEINYLGALQHPNLVKLVGYCIEDEHRMLVYEFMRRGCLENHLFGRLTTPLPWAVRIKIMLGAAKGLAFLHEESERPLIYRDFKTSNILLDSAYNAKLSDFGLAKDAPVGDKTHVSTLVMGTQGYVDPEYVITGHLTSKSDVYSFGVVLLEVLTGRQAIDYKRSEKEQCLVEWAKPYLKPGIGFYQLMDPKLQGQFSPRGAYKAMKLVSLCLSPAQKSRPKMSEIVKMLQYILHCNCDMPMPTLTIKSSHAGPSSYNSSRHGGNHVNKHPSRFNSHH | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g01734 | 297 | MobiDBLite | consensus disorder prediction | 268 | 284 | - | - | |
Trre2g01734 | 297 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 98 | 110 | IPR008271 | GO:0004672|GO:0006468 | |
Trre2g01734 | 297 | PIRSF | ILK | 1 | 259 | - | - | |
Trre2g01734 | 297 | ProSiteProfiles | Protein kinase domain profile. | 1 | 252 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre2g01734 | 297 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 271 | IPR011009 | - | |
Trre2g01734 | 297 | Gene3D | Transferase(Phosphotransferase) domain 1 | 55 | 260 | - | - | |
Trre2g01734 | 297 | MobiDBLite | consensus disorder prediction | 268 | 297 | - | - | |
Trre2g01734 | 297 | FunFam | Serine/threonine-protein kinase PBS1 | 54 | 266 | - | - | |
Trre2g01734 | 297 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 54 | - | - | |
Trre2g01734 | 297 | PANTHER | OS01G0588500 PROTEIN-RELATED | 2 | 251 | - | - | |
Trre2g01734 | 297 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 249 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g01734 | Trre-Chr2 | 14015483 | 14018075 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g01734 | 1 | 252 | Glycoside Hydrolase | AT3G07070 | 52.941 | 1.14e-88 | 269 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Trre2g01734 | PK_Tyr_Ser-Thr | 3.2e-39 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g01734 | - | - | tpra:123891935 | 442.58 |