Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g01717 ATGGTTCACTGCAATTCTTATTCATGTGTGGCTGATCATGTCCTAACTGTTGGGACAAATTGGGATGTTTGCGATTATGATTTTTCATTGAAGAAGAGAAAGAGTGATCTTGGCAATGGCACTAATAATGATGATGCTGTTTGGAGAAATTGGGAAGACTGGGAATATTATCTTCCAATAAAGAAGAGAAAGATCAAGGGGAGAATTTTGGACTATTGTGAATATGATCTTCCATCAAAGAAGAGACTACTAATCAATAAGGAAAAGAGTGATCTCAACAAGAACATTTCTTTTCTCTTTTCTTCAATTGAAAATAATGATTCTTTGTCTACCAGTCATGACGACAAAAAAATCGCAAACAAACAAGACACTAAGAAGACTTGTAATGTTGATGATGAATGGGAGATCAAGAAGGTGCTTGAAAAGAGCGATGTTTGTTGCGGTTTGAGTAGGCTTTTGTTGAAGAAAGAATTGACTCAAGAGTTTGTGATTCCGGTGTTGTTGGGTGGTGCTAAAGTTGCCGAGACAAATGGAGTGGAAGTTCAAGTATGGGACGTTGACACAAAGTCTCCTCATTCTCTCGTTTTCAGGATATGGACGTCCGCAAAAAGCCACGTTTTCACTACGGGATGGGTCAAAGATTTTGTTCTTAGAAGGAATCTAAAGAAAGGAGATAAAATTGGCTTACATTGGGATCAATATAACCAACGTTTTAATTTCTCTGTGATTTAG 732 0.373 MVHCNSYSCVADHVLTVGTNWDVCDYDFSLKKRKSDLGNGTNNDDAVWRNWEDWEYYLPIKKRKIKGRILDYCEYDLPSKKRLLINKEKSDLNKNISFLFSSIENNDSLSTSHDDKKIANKQDTKKTCNVDDEWEIKKVLEKSDVCCGLSRLLLKKELTQEFVIPVLLGGAKVAETNGVEVQVWDVDTKSPHSLVFRIWTSAKSHVFTTGWVKDFVLRRNLKKGDKIGLHWDQYNQRFNFSVI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g01717 243 Gene3D - 127 241 IPR015300 -
Trre2g01717 243 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 109 243 - -
Trre2g01717 243 SUPERFAMILY DNA-binding pseudobarrel domain 132 236 IPR015300 -
Trre2g01717 243 CDD B3_DNA 134 243 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g01717 Trre-Chr2 13887860 13888591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g01717 136 213 B3 DNA Binding Superfamily AT1G20600 35.897 1.87e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g01717 - - tpra:123900004 296.975